Gene SeD_A4312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4312 
SymbolwecD 
ID6874181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4161592 
End bp4162269 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content59% 
IMG OID642787241 
ProductTDP-fucosamine acetyltransferase 
Protein accessionYP_002217861 
Protein GI198244056 
COG category 
COG ID 
TIGRFAM ID[TIGR02382] TDP-D-fucosamine acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.840549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTCC GCGCCAGTAT TGAACCGTTA CTCTGGGAAA ATACGTTTTT TGGCGTGAAT 
AGCGGCATTG TGCGTATCGA TGCCTCAGCG CCCGAATTAA CGCCAGAAGC GCTGCAGGCG 
TGGCAACGCG TGCAGGTAAA AGTGCCGGCT GAAAACATCG CCTGGCTGTC GGCGTTGCAA 
TCGCTGGGAT TCTCTTTGGT TGAAGGCGAG GTGGATTTTG CGTTGCCGGT AAAAGGGCAT 
CGCGACCAGC ATGGCGCGGA AATTGCACAC CTTACGGACA TTCCTGCTTT GCGTCAGTTG 
GCCGGAGAGG CGTTTACGCA GAGTCGTTTT CGCGCGCCGT GGTATGCGCC CGACGCCAGC 
GCCCGTTTTT ACGCCCAGTG GATTGAGAAT GCGGTACGCG GCACGTTTGA TCACCAATGC 
CTGGTGCTTC GCACGGAGAC AGGCGCTATC CGCGGTTACG TCTCGCTGCG GGAATTGAAT 
GATACCGACG CGCGCATTGG CCTGTTGGCC GGACGCGGCG CGGGAGCGGA ACTTATGCAG 
GCGGCGATCT GTTGGGCGCA GAGTCGCGGC AAAGCAACAT TGCGGGTGGC GACCCAGTTG 
GGCAACACCG CCGCGCTTAA ACGTTACATA CAAAGCGGTG CCAACATCGA AAGCACTGCG 
TACTGGTTAT ACAGGTGA
 
Protein sequence
MPVRASIEPL LWENTFFGVN SGIVRIDASA PELTPEALQA WQRVQVKVPA ENIAWLSALQ 
SLGFSLVEGE VDFALPVKGH RDQHGAEIAH LTDIPALRQL AGEAFTQSRF RAPWYAPDAS 
ARFYAQWIEN AVRGTFDHQC LVLRTETGAI RGYVSLRELN DTDARIGLLA GRGAGAELMQ 
AAICWAQSRG KATLRVATQL GNTAALKRYI QSGANIESTA YWLYR