Gene SeD_A4310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4310 
SymbolrfbB2 
ID6873729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4160290 
End bp4161357 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content56% 
IMG OID642787239 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_002217859 
Protein GI198245411 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.847685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA TTCTGGTGAC CGGAGGCGCA GGCTTTATCG GATCTGCGGT GGTGCGGCAT 
ATCATCCATG AAACGGCAGA CGCGGTGGTG GTGGTGGATA AACTCACCTA TGCGGGCAAC
CTGATGTCTC TGGCGTCGGT GGCGCAAAGC GACCGTTTCG CCTTTGAGAA GGTGGATATC
TGCGATCGGG CATCACTGGA GCGAGTTTTC CAGCAGTATC AGCCCGATAG CGTGATGCAC
CTGGCGGCGG AAAGCCATGT AGACCGTTCC ATCGACGGCC CGGCGGCGTT TATTGAAACG
AATATCGTTG GTACTTACAC CTTGCTGGAA GCCGCTCGCG CTTACTGGTC CGCGCTTGAC
GCGGACGCTA AAGCGGCGTT CCGCTTCCAC CATATCTCCA CCGATGAAGT GTATGGCGAT
CTGCATACTG CAGACGATTT CTTCACCGAA ACCACGCCAT ATGCGCCAAG CAGCCCTTAT
TCCGCCTCCA AAGCCAGCAG CGACCATCTG GTACGCGCCT GGTTACGTAC CTACGGTCTG
CCTACGCTTG TCACCAACTG CTCTAATAAC TACGGGCCCT ACCATTTCCC GGAAAAACTG
ATCCCGCTGA TGATTCTGAA CGCGCTGGCG GGTAAACCAT TGCCGGTCTA TGGCAACGGT
CAGCAAATTC GCGACTGGCT GTATGTAGAG GATCATGCCC GTGCGTTGTA TCACGTGGTG
ACGAACGGCG CGGTGGGCGA AACGTATAAT ATCGGCGGTC ATAACGAACG TAAAAATCTG
GATGTGGTCA GGACGATCTG CGCTCTGCTG GAAGAACTGG CCCCACAAAA ACCGCAGGGT
GTGGCGAATT ATCACGATCT GATTACCTTC GTCGACGATC GACCCGGCCA TGACTTACGT
TATGCCATCG ACGCGTCGAA AATCGCCCGC GAGCTGGGCT GGACGCCGCA GGAAACCTTC
GAAAGCGGGA TGCGAAAAAC CGTTCAGTGG TATCTCGCCA ATGAGGCCTG GTGGAAACCC
GTGCAGGATG GCAGTTATCA GGGCGAACGC TTAGGACTGA AACGCTAA
 
Protein sequence
MKRILVTGGA GFIGSAVVRH IIHETADAVV VVDKLTYAGN LMSLASVAQS DRFAFEKVDI 
CDRASLERVF QQYQPDSVMH LAAESHVDRS IDGPAAFIET NIVGTYTLLE AARAYWSALD
ADAKAAFRFH HISTDEVYGD LHTADDFFTE TTPYAPSSPY SASKASSDHL VRAWLRTYGL
PTLVTNCSNN YGPYHFPEKL IPLMILNALA GKPLPVYGNG QQIRDWLYVE DHARALYHVV
TNGAVGETYN IGGHNERKNL DVVRTICALL EELAPQKPQG VANYHDLITF VDDRPGHDLR
YAIDASKIAR ELGWTPQETF ESGMRKTVQW YLANEAWWKP VQDGSYQGER LGLKR