Gene SeD_A4307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4307 
Symbol 
ID6870992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4156799 
End bp4157845 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content52% 
IMG OID642787236 
Productlipopolysaccharide biosynthesis protein WzzE 
Protein accessionYP_002217856 
Protein GI198245570 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3765] Chain length determinant protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAC CATTACCGGG GGCACGCGCG GTGAGCGCTG AAAATGAACT GGATATTCGC 
GGGTTGTTTC GTACTTTATG GGCTGGCAAA TTCTGGATTA TCGGCATTGG CCTGCTATTT
GCCCTTATCG CGTTAGCCTA TACCTTTTTT GCTCGTCAGG AGTGGAGTGC GACGGCGATC
ACCGATCGCC CAACCGTAAA TATGTTGGGC GGTTATTACT CCCAGCAGCA GTTTCTGCGC
AACCTGGATA TTAAGACCGA TCCTGCTTCT TCTGATAAGC CCTCGGTGAT GGATGAAGCG
TATAAAGAGT TCATCATGCA ACTTGCCTCC TGGGATACGC GTCGCGATTT CTGGTTACAG
ACGGACTATT ACAAGCAGCG AATGGTCGGG AATAGCAAAG CTGATGCGGC GATGCTTGAT
GAACTGATCA ATAACATACA GTTTACGCCC GGCGATTTTA CACGCGCCAT CAACGACAAT
GTGAAGCTGA TTGCTGAAAC TGCGCCGGAC GCCAATAATC TGCTGCGTCA GTATGTCGCA
TTCGCCAGCC AGCGGGCGGC GAGCCATCTG AATGATGAAT TAAAAGGTGC CTGGGCTGCG
CGTACCGTGC AGATGAAAGC CCAGGTCAAA CGGCAGGAGG AGGTTGCGAA AGCGATCTAT
TCGCGTCGTG TAAACAGTAT TGAGCAGGCG CTCAAAATTG CGGAACAACA TAATATTTCT
CGTAGCGCGA CGGATGTCCC GGCGGATGAA TTACCGGACT CAGAGCTTTT TTTACTCGGT
CGCCCTATGT TGCAGGCGCG TCTTGAAAAT CTGCAAGCGG TTGGCCCTGC GTTCGATTTG
GACTACTTTC AAAATCGGGC AATGTTGAAT ACGCTTAATG TGGGGCCGAC CCTGGACCCT
CGTTTTCAGA CCTATCGTTA TTTGCGTACG CCGGAAGAAC CGGTAAAACG TGATAGCCCA
CGCCGAGCCT TCCTGATGAT CATGTGGGGT ATCGTTGGGG CGCTAATCGG TGCGGGCGTT
GCCTTAACCC GTCGCCGCAC GATTTAG
 
Protein sequence
MTQPLPGARA VSAENELDIR GLFRTLWAGK FWIIGIGLLF ALIALAYTFF ARQEWSATAI 
TDRPTVNMLG GYYSQQQFLR NLDIKTDPAS SDKPSVMDEA YKEFIMQLAS WDTRRDFWLQ
TDYYKQRMVG NSKADAAMLD ELINNIQFTP GDFTRAINDN VKLIAETAPD ANNLLRQYVA
FASQRAASHL NDELKGAWAA RTVQMKAQVK RQEEVAKAIY SRRVNSIEQA LKIAEQHNIS
RSATDVPADE LPDSELFLLG RPMLQARLEN LQAVGPAFDL DYFQNRAMLN TLNVGPTLDP
RFQTYRYLRT PEEPVKRDSP RRAFLMIMWG IVGALIGAGV ALTRRRTI