| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4301 |
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| Symbol | rep |
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| ID | 6874631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 4148356 |
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| End bp | 4150380 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642787230 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_002217850 |
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| Protein GI | 198245972 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.165801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTAA ATCCCGGCCA ACAACACGCT GTCGAATTCG TCACCGGACC CTGCCTGGTG
CTGGCAGGAG CGGGTTCTGG TAAAACTCGC GTAATTACCA ATAAAATCGC CCACCTGATC
CGCGGATGCG GCTATCAGGC CCGGCATATT GCGGCGGTGA CGTTTACCAA CAAGGCAGCG
CGTGAGATGA AAGAACGCGT CGGGCAGACG CTCGGCCGTA AGGAAGCGCG CGGTTTGATG
ATCTCCACCT TTCATACGCT AGGGCTGGAT ATTATTAAGC GCGAGTACGC TGCGCTGGGG
ATGAAATCGA ACTTTTCATT GTTTGACGAT ACCGACCAGG TCGCCTTGCT CAAAGAGCTG
ACCGAAGGCC TGATCGAAGA CGACAAGGTT CTGTTGCAAC AGCTGATCTC CACGATCTCC
AACTGGAAAA ACGATCTCAA AACGCCTGCA CAGGCAGCGG CGGGGGCGAA AGGTGAACGC
GATCGTATTT TTGCCCACTG CTACGGGCTT TACGACGCCC ATATGAAGGC ATGCAACGTT
CTCGATTTTG ATGATTTGAT TTTGCTGCCG ACGCTGCTGC TGCAACGCAA TGACGAGGTG
CGCGAGCGCT GGCAGAATAA AATTCGTTAT CTACTGGTGG ATGAATATCA GGATACTAAC
ACCAGCCAGT ATGAGTTGGT TAAGCTGCTG GTTGGGCAAC GCGCGCGCTT TACGGTCGTA
GGCGATGACG ATCAGTCTAT CTACTCCTGG CGCGGGGCGC GTCCGCAAAA CCTGGTGTTA
CTGAGCCAGG ACTTTCCGGC GCTGCAGGTG ATTAAACTGG AGCAAAACTA TCGTTCTTCG
GGCCGCATCC TGAAAGCGGC GAATATTCTC ATCGCCAACA ATCCGCACGT CTTTGAAAAG
CGCCTCTTTT CCGAACTCGG TTACGGCGCG GAACTCAAAG TGTTAAGCGC AAACAATGAA
GAGCATGAAG CTGAGCGCGT TACCGGCGAA CTGATTGCCC ATCACTTTGT GAACAAGACC
CAGTACAAGG ATTACGCCAT TCTGTATCGC GGGAATCATC AGTCGCGGGT ATTTGAAAAA
TTCCTCATGC AGAACCGCAT TCCGTACAAA ATTTCCGGCG GCACCTCATT CTTCTCCCGT
CCGGAGATTA AAGACCTGCT GGCCTACCTG CGGGTGTTGA CCAACCCGGA TGATGACAGC
GCTTTCCTGC GCATCGTGAA TACGCCAAAA CGCGAAATCG GTCCGGCCAC GCTGCAAAAG
CTGGGTGAAT GGGCAATGAC GCGTAATAAA AGCCTGTTTA CCGCCAGCTT TGATATGGGG
CTTAGCCAAA AGCTGACCGG GCGTGGTTAC GATTCATTGA CGCGTTTTAC CCACTGGCTG
GGGGAAATCC AGCGTCTGGC CGAACGCGAG CCTGTCGCCG CCGTGCGCGA TCTCATCCAC
GGTATTGACT ATGAATCCTG GTTGTACGAA ACCTCGCCGA GCCCCAAAGC GGCGGAAATG
CGTATGAAAA ACGTTAACCA GCTCTTTAGC TGGATGACTG AGATGCTGGA AGGCAACGAA
CTCGATGAGC CGATGACGCT CACCCAGGTG GTTACACGCT TTACGCTGCG CGATATGATG
GAGCGCGGCG AGAGCGAAGA AGAGCTGGAT CAGGTACAGT TGATGACGCT TCATGCGTCG
AAAGGACTGG AATTCCCGTA TGTCTATATG GTGGGAATGG AAGAAGGATT TTTGCCGCAT
CAAAGCAGCA TTGACGAAGA CAATATTGAG GAAGAGCGTC GGCTGGCCTA TGTCGGGATC
ACTCGTGCGC AGAAAGAGCT CACCTTTACA TTATGTAAAG AGCGCCGTCA GTATGGGGAA
CTGGTGCGCC CGGAACCCAG TCGCTTCCTG TTAGAACTGC CGCAGGATGA TTTAATCTGG
GAGCAGGAGC GCAAAGTGGT AAGCGCTGAG GAGCGAATGC AAAAAGGGCA AAGTCACCTG
GCTAATCTGA AAGCCATGAT GGCGGCAAAG CGAGCGAAAT CGTAG
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| Protein sequence | MRLNPGQQHA VEFVTGPCLV LAGAGSGKTR VITNKIAHLI RGCGYQARHI AAVTFTNKAA
REMKERVGQT LGRKEARGLM ISTFHTLGLD IIKREYAALG MKSNFSLFDD TDQVALLKEL
TEGLIEDDKV LLQQLISTIS NWKNDLKTPA QAAAGAKGER DRIFAHCYGL YDAHMKACNV
LDFDDLILLP TLLLQRNDEV RERWQNKIRY LLVDEYQDTN TSQYELVKLL VGQRARFTVV
GDDDQSIYSW RGARPQNLVL LSQDFPALQV IKLEQNYRSS GRILKAANIL IANNPHVFEK
RLFSELGYGA ELKVLSANNE EHEAERVTGE LIAHHFVNKT QYKDYAILYR GNHQSRVFEK
FLMQNRIPYK ISGGTSFFSR PEIKDLLAYL RVLTNPDDDS AFLRIVNTPK REIGPATLQK
LGEWAMTRNK SLFTASFDMG LSQKLTGRGY DSLTRFTHWL GEIQRLAERE PVAAVRDLIH
GIDYESWLYE TSPSPKAAEM RMKNVNQLFS WMTEMLEGNE LDEPMTLTQV VTRFTLRDMM
ERGESEEELD QVQLMTLHAS KGLEFPYVYM VGMEEGFLPH QSSIDEDNIE EERRLAYVGI
TRAQKELTFT LCKERRQYGE LVRPEPSRFL LELPQDDLIW EQERKVVSAE ERMQKGQSHL
ANLKAMMAAK RAKS
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