Gene SeD_A4297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4297 
Symbol 
ID6872741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4144574 
End bp4144915 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content45% 
IMG OID642787226 
ProductXRE family transcriptional regulator 
Protein accessionYP_002217846 
Protein GI198243432 
COG category[S] Function unknown 
COG ID[COG5606] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGCCA AAACTGATAG TGATATTCGC CATGTGACGC CATCTGGCGG TAATGTTTTT 
GCTGATTTGG GGTTTCATAA GCAGGACGCA GAAAAGTTTT ACGCTGATTC CCTGAATGAA 
ATCGAAAACA CGTTAGCCAT TAAACAACAG CTAATGGAAG AAATTACCCT CTGGATTACG 
CAAAACCAGA TGAAGCAAGC CGAGGTTGCT ACAGTTTTGC ATATATCCCG ACCGCGCGTT 
TCGGATGTCG TCAACAAGAA ATGCAGCAAA TTCACCATTG ATGCTCTGGT GAATATGCTT 
AGCCGTATTG GGAAGCCTGT TCGGGTAATG GTAGGGCCGT AA
 
Protein sequence
MIAKTDSDIR HVTPSGGNVF ADLGFHKQDA EKFYADSLNE IENTLAIKQQ LMEEITLWIT 
QNQMKQAEVA TVLHISRPRV SDVVNKKCSK FTIDALVNML SRIGKPVRVM VGP