Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4295 |
Symbol | ilvA |
ID | 6872883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4142433 |
End bp | 4143977 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642787224 |
Product | threonine dehydratase |
Protein accession | YP_002217844 |
Protein GI | 198244246 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAAT CTCAACCACT GTCAGTCGCG CCGGAAGGGG CGGAGTATCT GCGCGCGGTG CTACGCGCGC CAGTATACGA AGCGGCGCAG GTGACGCCGC TGCAAAAAAT GGAAAAGCTC TCGTCACGTC TGGATAACGT TATTCTCGTC AAACGCGAAG ACCGGCAGCC GGTACATAGC TTTAAGCTGC GCGGCGCTTA CGCGATGATG GCCGGATTGA CCGAAGAACA AAAAGCCCAC GGCGTGATTA CCGCGTCGGC GGGGAACCAT GCACAGGGCG TGGCGTTTTC CTCCGCGCGG CTTGGCGTGA AGTCTCTGAT CGTCATGCCA AAAGCAACGG CGGATATTAA AGTCGATGCG GTACGCGGTT TTGGCGGCGA AGTGCTGTTG CACGGCGCTA ATTTTGATGA AGCGAAAGCG AAAGCTATTG AACTGGCGCA GCAGCAGGGT TTTACCTGGG TGCCGCCGTT TGATCACCCA ATGGTGATCG CCGGGCAGGG CACGCTGGCG CTGGAGCTGC TTCAGCAGGA TTCGCATCTC GATCGTGTCT TTGTGCCGGT TGGCGGCGGC GGCCTGGCGG CGGGCGTAGC GGTACTGATC AAACAATTGA TGCCGCAAAT CAAAGTGATT GCCGTCGAAG CGGATGATTC CGCCTGCCTG AAAGCGGCGT TGGAAGCCGG TCATCCAGTG GATCTCCCGC GCGTTGGGTT ATTTGCTGAA GGCGTGGCGG TAAAACGCAT CGGCGACGAA ACCTTCCGCC TGTGCCAGGA ATATCTCGAC GACATTATTA CAGTCGATAG CGACGCTATC TGCGCGGCGA TGAAAGATCT GTTTGAAGAT GTGCGTGCGG TGGCGGAGCC GTCCGGCGCG CTGGCGCTGG CGGGGATGAA AAAATATATC GCCCTGCACA ATATTCGCGG CGAACGCCTG GCGCACGTCC TTTCCGGCGC CAACGTCAAC TTCCACGGCT TGCGCTATGT GTCTGAACGC TGCGAGCTGG GGGAACAGCG CGAAGCGTTA CTGGCGGTGA CCATTCCGGA AGAAAAGGGG AGCTTTCTCA AATTCTGCCA GTTGCTTGGC GGGCGTATGG TCACCGAATT TAACTACCGT TTTGCCGACG CGAAAAATGC CTGTATTTTT GTCGGCGTAC GCGTCAGTCA GGGGCTGGAG GAGCGAAAAG AGATTATCAC CCAACTGTGC GACGGCGGTT ATAGCGTAGT GGATCTCTCC GACGATGAAA TGGCGAAGCT GCATGTGCGC TATATGGTCG GCGGGCGTCC ATCCCATCCG CTACAGGAAC GCCTCTACAG CTTTGAATTT CCGGAGTCGC CCGGCGCGTT GCTCAAATTC CTGCATACGC TTGGCACGCA CTGGAATATT TCGCTATTCC ATTACCGCAG CCACGGTACC GATTATGGCC GCGTGCTGGC GGCGTTCGAG TTAGGCGATC ATGAGCCGGA TTTCGAAACC CGGCTGCATG AGCTGGGCTA TGAATGCCAT GATGAGAGCA ATAACCCGGC GTTCCGGTTC TTTCTGGCGG GTTAA
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Protein sequence | MAESQPLSVA PEGAEYLRAV LRAPVYEAAQ VTPLQKMEKL SSRLDNVILV KREDRQPVHS FKLRGAYAMM AGLTEEQKAH GVITASAGNH AQGVAFSSAR LGVKSLIVMP KATADIKVDA VRGFGGEVLL HGANFDEAKA KAIELAQQQG FTWVPPFDHP MVIAGQGTLA LELLQQDSHL DRVFVPVGGG GLAAGVAVLI KQLMPQIKVI AVEADDSACL KAALEAGHPV DLPRVGLFAE GVAVKRIGDE TFRLCQEYLD DIITVDSDAI CAAMKDLFED VRAVAEPSGA LALAGMKKYI ALHNIRGERL AHVLSGANVN FHGLRYVSER CELGEQREAL LAVTIPEEKG SFLKFCQLLG GRMVTEFNYR FADAKNACIF VGVRVSQGLE ERKEIITQLC DGGYSVVDLS DDEMAKLHVR YMVGGRPSHP LQERLYSFEF PESPGALLKF LHTLGTHWNI SLFHYRSHGT DYGRVLAAFE LGDHEPDFET RLHELGYECH DESNNPAFRF FLAG
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