Gene SeD_A4288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4288 
Symbol 
ID6875824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4134139 
End bp4134975 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content51% 
IMG OID642787217 
Producttranscriptional regulator HdfR 
Protein accessionYP_002217837 
Protein GI198241791 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATACGG AATTGTTAAA AACTTTCCTG GAAGTTAGCC GGACACGCCA TTTCGGGCGG 
GCCGCAGAAG CACTTTACCT GACGCAATCC GCGGTGAGCT TTCGTATCAG GCAACTGGAG 
AATCAACTGG GCGTAAACCT TTTTACGCGG CACAGAAACA ATATCCGTTT AACCACGGCT 
GGCGAAAAAC TTTTACCGTA TGCGGAAACG CTGATGAATA CGTGGCAGGC GGCACGTAAA 
GAGGTGGCGC ATACCTCACG CCATAACGAG TTTTCCATCG GCGCCAGCGC GTCTTTATGG 
GAGTGTATGC TTAACGCCTG GCTGGGGCGA CTGTACCAAC TACAGGAGCC GCAAAGCGGC 
CTGCAGTTCG AAGCCAGAAT CGCTCAACGG CAATCGCTTG TGAAGCAACT TCATGAACGC 
CAGCTTGATC TCCTCATTAC TACCGAAGCG CCCAAAATGG ATGAGTTCAG CAGTCAGCTG 
TTAGGGCACT TCACTTTGGC GTTATATTGC AGCAGCCCTG CCCGTAAGAA ATCAGAACTC 
AATTATCTGC GGCTGGAGTG GGGACCAGAC TTCCAACAGC ATGAAACAGG GCTGATCGCA 
GCAGATAAAG TGCCGGTATT AACAACCAGC TCAGCCGAAC TCGCCCGACA GCAGCTTAGC 
GCATTAAATG GCTGTAGCTG GCTTCCTGTA AACTGGGCAA ATGAAAAGGG CGGATTACAT 
ACCGTTGCCG ACAGCGCAAC GCTTTCACGG CCACTATACG CTATTTGGCT GCAAAACAGC 
GATAGATACT CGCTGATCTG CGATCTGTTA AAAACGGATG TGCTGGATGA ACAATGA
 
Protein sequence
MDTELLKTFL EVSRTRHFGR AAEALYLTQS AVSFRIRQLE NQLGVNLFTR HRNNIRLTTA 
GEKLLPYAET LMNTWQAARK EVAHTSRHNE FSIGASASLW ECMLNAWLGR LYQLQEPQSG 
LQFEARIAQR QSLVKQLHER QLDLLITTEA PKMDEFSSQL LGHFTLALYC SSPARKKSEL 
NYLRLEWGPD FQQHETGLIA ADKVPVLTTS SAELARQQLS ALNGCSWLPV NWANEKGGLH 
TVADSATLSR PLYAIWLQNS DRYSLICDLL KTDVLDEQ