Gene SeD_A4276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4276 
SymbolrbsB 
ID6871913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4123163 
End bp4124053 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content54% 
IMG OID642787206 
ProductD-ribose transporter subunit RbsB 
Protein accessionYP_002217832 
Protein GI198245799 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGA AAAAACTGGC TACCTTGGTA TCTGCTGTTG CGCTGAGCGC CACCGTGAGC 
GCGAATGCAA TGGCGAAGGA CACCATTGCG CTGGTGATCT CTACCCTCAA TAATCCCTTC
TTCGTGTCGT TAAAAGACGG GGCGCAAAAA GAGGCGGATA AACTGGGTTA TAACCTGGTG
GTGCTGGACT CCCAGAACAA CCCTGCCAAA GAGCTGGCGA ACGTGCAGGA TTTAACCGTT
CGCGGGACCA AAATTTTGCT GATCAACCCG ACTGACTCCG ATGCGGTGGG TAACGCGGTG
AAGATGGCTA ACCAGGCGAA GATTCCGGTT ATCACGCTTG ACCGCCAGGC AACCAAAGGC
GATGTCGTCA GCCATATCGC GTCTGATAAC GTGCTGGGCG GTAAGATCGC TGGCGACTAT
ATCGCGAAAA AAGCTGGCGA AGGCGCCAAA GTGATTGAGT TGCAAGGCAT TGCCGGAACA
TCTGCGGCGC GTGAGCGTGG CGAAGGTTTC CAGCAGGCGG TAGCCGTCCA CAAATTTAAT
GTCCTGGCCA GCCAGCCTGC CGATTTCGAC CGTACTAAGG GTCTGAACGT CATGCAGAAC
CTGCTGACCG CGCATCCGGA TGTTCAGGCT GTCTTCGCCC AGAACGATGA AATGGCGCTG
GGCGCACTGC GCGCGCTGCA AACTGCCGGT AAAGCAGATG TGATGGTGGT TGGATTTGAC
GGTACGCCGG ATGGCGAAAA GGCCGTAAAA GATGGCAAAC TGGCAGCGAC TATCGCTCAG
TTACCGGATC AAATCGGCGC CAAAGGCGTT GAAGTGGCGG ATAAGGTGCT GAAAGGCGAA
AAAGTTCAGG CCAAATATCC GGTTGACCTG AAACTGGTCA TCAAGCAGTA A
 
Protein sequence
MNMKKLATLV SAVALSATVS ANAMAKDTIA LVISTLNNPF FVSLKDGAQK EADKLGYNLV 
VLDSQNNPAK ELANVQDLTV RGTKILLINP TDSDAVGNAV KMANQAKIPV ITLDRQATKG
DVVSHIASDN VLGGKIAGDY IAKKAGEGAK VIELQGIAGT SAARERGEGF QQAVAVHKFN
VLASQPADFD RTKGLNVMQN LLTAHPDVQA VFAQNDEMAL GALRALQTAG KADVMVVGFD
GTPDGEKAVK DGKLAATIAQ LPDQIGAKGV EVADKVLKGE KVQAKYPVDL KLVIKQ