Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4273 |
Symbol | rbsD |
ID | 6872813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4120235 |
End bp | 4120654 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642787203 |
Product | D-ribose pyranase |
Protein accession | YP_002217829 |
Protein GI | 198243012 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAG GCACCGTACT CAACTCTGAA ATCTCGTCGG TCATTTCCCG TCTGGGGCAT ACTGATACTC TGGTGGTCTG TGATGCGGGT TTACCCATCC CGAATAGCAC CGCGCGTATC GATATGGCAC TAACCCAGGG CGTACCTTCT TTTATGCAGG TGGTGGATGT CGTGACCCGG GAAATGCAGG TTGAGGCGGC GATTCTTGCA ACGGAAATCA AACAACAGAA TCCGCAGCTC CACGAAACGT TGCTCACTCA CCTTGAGCAA CTGCAGCAAC ACCAGGGAAA CACCATAAAA ATTAGTTATA CGACACACGA ACAATTCAAA AAATTGACTG CAGACAGTCA GGCGGTGATT CGCAGCGGGG AGTGTTCCCC GTATGCGAAC GTCATTCTTT GCGCTGGCGT TACGTTCTGA
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Protein sequence | MKKGTVLNSE ISSVISRLGH TDTLVVCDAG LPIPNSTARI DMALTQGVPS FMQVVDVVTR EMQVEAAILA TEIKQQNPQL HETLLTHLEQ LQQHQGNTIK ISYTTHEQFK KLTADSQAVI RSGECSPYAN VILCAGVTF
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