Gene SeD_A4272 details

Gene Information

• Locus tag: SeD_A4272
• Symbol: trkD
• ID: 6873687
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: +
• Start bp: 4118150
• End bp: 4120018
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642787202
• Product: potassium transport protein Kup
• Protein accession: YP_002217828
• Protein GI: 198243483
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3158] K+ transporter
• TIGRFAM ID: [TIGR00794] potassium uptake protein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.461844
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 67
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCACTG ATAATAAGCA ATCGTTGCCT GCGATTACCC TCGCAGCTAT TGGGGTTGTC 
TACGGTGATA TTGGTACCAG CCCGCTTTAT ACGCTTCGTG AATGTTTGTC CGGTCAGTTT 
GGTTTTGGCG TTGAACGAGA TGCCGTGTTT GGTTTTCTGT CGCTGATCTT CTGGCTACTC 
ATCTTTGTGG TTTCCATCAA ATATCTCACC TTCGTGATGC GCGCCGATAA CGCGGGTGAA 
GGTGGAATTT TGACGCTGAT GTCGCTTGCC GGGCGTAATA CCTCGGCGCG CACCACATCC 
ATGTTAGTTA TCATGGGACT GATAGGCGGC AGCTTTTTCT ATGGCGAAGT GGTCATTACG 
CCGGCGATTT CGGTGATGTC GGCGATTGAA GGCCTGGAGA TTGTCGCGCC GCAGCTGGAC 
ACCTGGATTG TCCCGCTCTC CATTATTGTG CTGACTCTGT TGTTTATGAT TCAGAAGCAC 
GGTACGGGAA TGGTAGGGAA ACTCTTTGCG CCGATCATGC TGACCTGGTT TTTAATCCTG 
GCGGTACTTG GCCTGCGCAG TATTATCGCC AATCCCGAAG TGTTACATGC GCTGAATCCT 
GTCTGGGCGG TACGTTTTTT CCTTGAATAT AAAACCGTAT CATTTATTGC GTTGGGCGCG 
GTGGTGCTGT CGATTACCGG CGTAGAGGCG TTGTACGCCG ATATGGGACA CTTCGGTAAG 
TTCCCGATTC GCCTGGCGTG GTTTACCGTG GTATTGCCGT CGTTAGTACT GAACTACTTT 
GGTCAGGGCG CATTGCTACT TAAGCATCCG GAAGCGATTA AAAACCCCTT CTTCCTGTTG 
GCGCCGGACT GGGCGTTAAT TCCGCTGCTG ATTCTGGCCG CGCTGGCGAC GGTGATCGCC 
TCCCAGGCGG TCATTTCCGG CGTCTTTTCG CTGACGCGTC AGGCCGTGCG TCTTGGCTAT 
TTGTCGCCAA TGCGCATTAT CCATACCTCC GAGATGGAGT CCGGTCAGAT CTATATCCCT 
TTCGTTAACT GGCTGCTTTA TTTCGCGGTC GTGGTTGTTA TTGTTAGCTT TGAGCACTCC 
AGCAACCTGG CGGCGGCCTA TGGTATCGCC GTGACCGGCA CGATGGTGCT GACGTCTATT 
CTTTCTACGA CCGTGGCGCG TAAGAACTGG CACTGGAACA AATATTTTGT CGCGCTGATC 
CTCATCGCAT TCCTGTGCGT GGATATCCCG CTGTTCTCGG CTAACCTCGA TAAATTGTTG 
TCCGGCGGTT GGCTGCCGCT GAGCCTGGGT CTGATCATGT TCACGATCAT GACCACCTGG 
AAGAGCGAGC GTTTCCGTCT GTTGCGTCGT ATGCATGAAC ACGGTAATTC GCTGGAAGCG 
ATGATTGCTT CGCTGGAGAA GTCACCGCCG GTTCGGGTGC CGGGTACTGC CGTATACATG 
TCGCGCGCGC TCAGTGTGAT CCCTTTTGCT TTATTGCATA ACCTGAAGCA CAACAAAGTG 
TTGCATGAGC GCGTAATCTT ACTGACGTTG CGTACAGAAG ATGCGCCATA TGTGCATAAC 
GTTCGCCGGG TGCAGATTGA GCAGTTGTCT CCGACATTCT GGCGCGTGGT GGCTAGCTAC 
GGCTGGCGCG AAACGCCAAA CGTTGAAGAG GTGTTCCACC GCTGCGGTCT GGAAGGGCTT 
AGCTGTCGGA TGATGGAAAC GTCGTTCTTT ATGTCGCACG AGTCGTTGAT TGTCGGCAAA 
CGCCCGTGGT ATTTGCGTCT GCGTGGCAAG CTGTATTTGT TGTTGCAACG CAACGCCCTG 
CGCGCGCCGG ATCAGTTCGA GATCCCGCCT AACCGCGTGA TTGAGTTAGG TACGCAGGTC 
GAGATTTAA 

 

Protein sequence

MSTDNKQSLP AITLAAIGVV YGDIGTSPLY TLRECLSGQF GFGVERDAVF GFLSLIFWLL 
IFVVSIKYLT FVMRADNAGE GGILTLMSLA GRNTSARTTS MLVIMGLIGG SFFYGEVVIT 
PAISVMSAIE GLEIVAPQLD TWIVPLSIIV LTLLFMIQKH GTGMVGKLFA PIMLTWFLIL 
AVLGLRSIIA NPEVLHALNP VWAVRFFLEY KTVSFIALGA VVLSITGVEA LYADMGHFGK 
FPIRLAWFTV VLPSLVLNYF GQGALLLKHP EAIKNPFFLL APDWALIPLL ILAALATVIA 
SQAVISGVFS LTRQAVRLGY LSPMRIIHTS EMESGQIYIP FVNWLLYFAV VVVIVSFEHS 
SNLAAAYGIA VTGTMVLTSI LSTTVARKNW HWNKYFVALI LIAFLCVDIP LFSANLDKLL 
SGGWLPLSLG LIMFTIMTTW KSERFRLLRR MHEHGNSLEA MIASLEKSPP VRVPGTAVYM 
SRALSVIPFA LLHNLKHNKV LHERVILLTL RTEDAPYVHN VRRVQIEQLS PTFWRVVASY 
GWRETPNVEE VFHRCGLEGL SCRMMETSFF MSHESLIVGK RPWYLRLRGK LYLLLQRNAL 
RAPDQFEIPP NRVIELGTQV EI