Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4257 |
Symbol | atpA |
ID | 6874973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4104992 |
End bp | 4106533 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642787187 |
Product | F0F1 ATP synthase subunit alpha |
Protein accession | YP_002217813 |
Protein GI | 198246029 |
COG category | [C] Energy production and conversion |
COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTGA ATTCCACCGA AATCAGCGAA CTGATCAAGC AGCGCATTGC TCAGTTCAAT GTGGTGAGCG AAGCTCACAA CGAAGGTACT ATTGTTTCTG TCAGTGACGG TGTTATCCGC ATTCACGGCC TGGCCGATTG TATGCAGGGT GAAATGATCT CCCTGCCGGG TAACCGTTAC GCTATCGCAC TGAACCTGGA GCGCGACTCC GTGGGTGCGG TAGTCATGGG TCCATACGCT GACCTTGCCG AAGGCATGAA GGTTAAATGT ACGGGTCGTA TCCTGGAAGT TCCGGTTGGC CGCGGTCTGC TGGGACGTGT GGTGAACACC TTGGGTGCGC CAATTGACGG TAAAGGTCCG GTTGATAATG ACGGCTTCTC TGCCGTTGAA GCGATTGCGC CGGGCGTTAT CGATCGTCAG TCTGTCGATC AGCCGGTGCA GACCGGCTAT AAAGCCGTTG ACTCCATGAT CCCAATCGGT CGTGGTCAGC GTGAACTGAT CATCGGTGAC CGTCAGACCG GTAAAACCGC GCTGGCTATC GACGCCATCA TCAACCAGCG CGATTCCGGT ATCAAATGTA TCTATGTCGC TATCGGCCAG AAAGCGTCCA CCATCTCTAA CGTGGTGCGT AAACTGGAAG AACACGGCGC GCTGGCTAAC ACCATCGTTG TGGTGGCGAC CGCGTCCGAA TCCGCTGCTC TGCAATATCT GGCGCCGTAT GCCGGTTGCG CAATGGGCGA ATACTTCCGT GACCGCGGTG AAGATGCGCT GATCATTTAC GATGACCTGT CTAAACAGGC TGTTGCTTAC CGTCAGATCT CCCTGCTGCT CCGTCGTCCG CCAGGACGTG AAGCATTCCC GGGCGACGTA TTCTACCTCC ACTCTCGTCT GCTGGAGCGT GCTGCGCGTG TTAACGCCGA CTACGTCGAA GCCTTCACCA AAGGTGAAGT GAAAGGGAAA ACCGGCTCTC TGACCGCGCT GCCGATTATC GAAACGCAGG CAGGTGACGT TTCCGCGTTC GTTCCGACCA ACGTAATTTC CATTACCGAT GGTCAGATCT TCCTGGAATC TAACCTGTTT AACGCCGGTA TTCGTCCTGC GGTTAACCCG GGTATCTCGG TATCCCGTGT AGGTGGCGCA GCCCAGACCA AGATCATGAA AAAACTGTCC GGTGGTATTC GTACCGCGCT GGCGCAGTAT CGTGAACTGG CGGCGTTCTC TCAGTTTGCA TCCGACCTTG ACGATGCCAC CCGTAAACAG CTTGACCACG GTCAGAAAGT GACCGAACTG CTGAAACAGA AACAGTATGC GCCGATGTCC GTCGCGCAGC AGTCTCTGGT TCTGTTCGCA GCAGAACGTG GTTATCTGGC GGATGTCGAA CTGGCGAAAA TCGGTAGCTT CGAAGCCGCA CTGCTGGCTT ACGTCGACCG TGATCACGCT CCGCTGATGC AAGAGATCAA CCAGTCCGGT GGCTATAACG ACGAAATCGA AGGCAAGCTG AAAGGCATCC TCGATTCCTT CAAAGCAACC CAGTCCTGGT AA
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Protein sequence | MQLNSTEISE LIKQRIAQFN VVSEAHNEGT IVSVSDGVIR IHGLADCMQG EMISLPGNRY AIALNLERDS VGAVVMGPYA DLAEGMKVKC TGRILEVPVG RGLLGRVVNT LGAPIDGKGP VDNDGFSAVE AIAPGVIDRQ SVDQPVQTGY KAVDSMIPIG RGQRELIIGD RQTGKTALAI DAIINQRDSG IKCIYVAIGQ KASTISNVVR KLEEHGALAN TIVVVATASE SAALQYLAPY AGCAMGEYFR DRGEDALIIY DDLSKQAVAY RQISLLLRRP PGREAFPGDV FYLHSRLLER AARVNADYVE AFTKGEVKGK TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLESNLF NAGIRPAVNP GISVSRVGGA AQTKIMKKLS GGIRTALAQY RELAAFSQFA SDLDDATRKQ LDHGQKVTEL LKQKQYAPMS VAQQSLVLFA AERGYLADVE LAKIGSFEAA LLAYVDRDHA PLMQEINQSG GYNDEIEGKL KGILDSFKAT QSW
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