Gene SeD_A4254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4254 
SymbolatpC 
ID6872227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4102229 
End bp4102642 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content56% 
IMG OID642787184 
ProductF0F1 ATP synthase subunit epsilon 
Protein accessionYP_002217810 
Protein GI198242576 
COG category[C] Energy production and conversion 
COG ID[COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 
TIGRFAM ID[TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTACC ACCTGGATGT CGTCAGCGCG GAGCAACAAA TGTTCTCCGG TCTGGTCGAG 
AAAATCCAGG TTACGGGTAG CGAAGGCGAA CTGGGGATTT ACCCGGGGCA CGCGCCGCTA
CTCACCGCCA TTAAGCCTGG TATGATTCGC ATCGTTAAGC AGCACGGTCA TGAAGAGTTT
ATCTATCTGT CCGGCGGCAT TCTGGAAGTG CAGCCTGGCA GCGTGACCGT TCTGGCGGAT
ACCGCGATTC GCGGTCAGGA TCTCGACGAA GCGCGAGCCC TGGAAGCGAA GCGTAAAGCC
GAAGAGCACA TTAAGAGCTC GCACGGTGAC GTGGATTACG CTCAGGCGTC TGCGGAACTG
GCCAAAGCGA TCGCTAAACT GCGCGTTATC GAGTTGACCA AAAAAGCGAT GTAA
 
Protein sequence
MTYHLDVVSA EQQMFSGLVE KIQVTGSEGE LGIYPGHAPL LTAIKPGMIR IVKQHGHEEF 
IYLSGGILEV QPGSVTVLAD TAIRGQDLDE ARALEAKRKA EEHIKSSHGD VDYAQASAEL
AKAIAKLRVI ELTKKAM