Gene SeD_A4253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4253 
Symbol 
ID6873841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4101301 
End bp4101999 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content50% 
IMG OID642787183 
Producthypothetical protein 
Protein accessionYP_002217809 
Protein GI198242942 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTC AGCCATCCTT TGCGGGTCCA CAACCCGACT CAAGGATTGA TCGTACTACC 
TTTATTCGTC GCGCTTATCT TCATCTCGCC GTCGCCATCG TCGGTTTTAT CGTATTGAGC
GCGGCGTGGA GTTTTATAGG GGTCGGGGAG TATGCGCTTG ATGTGCTGCT GGCTGGTGGA
AGATATAGCT GGTTGGTTGT TCTCGGCGCT TTTATGCTGG TGGGAATGCT GGCAACCCGT
CTGGCGGATA ATGCGGGGAC TAATCAAACG CAACTTATCG GGCTGGGGAT TTATGTGTTG
GCAGAAGCCC TGATTTTTGC CCCCCTGTTA ACGGTGGCGG CGTATATTAA CCCGTCGAGC
ATTGGCGCGG CGGCAATAAC GACTCTGTTG CTGGTTGGCG GTCTGACGTT TACCGCTTTT
TCCATAAAAA AAGACTTTTC TTTTCTGCGC TCGTTTCTGA CTATGGCTGG GTTCATTGCT
TTTGGCGCGA TTATTGCCAG CGTCATCTGC GGCTTCTCGC TGGGCGTCTG GTTTTCTGCG
CTAATGGTAC TGCTGTGCGC CGGGTTTATA CTTTACGATA CTTCTAACAT TATTCACCAT
TACCCTACCG ATCGCCCAGC TGGCGCGGCA TTACATCTGT TTGCTTCTAT CGCGACCATG
TTCTGGTATA TTTTGCGGAT TTTTATGTCG CGTAATTAA
 
Protein sequence
MSFQPSFAGP QPDSRIDRTT FIRRAYLHLA VAIVGFIVLS AAWSFIGVGE YALDVLLAGG 
RYSWLVVLGA FMLVGMLATR LADNAGTNQT QLIGLGIYVL AEALIFAPLL TVAAYINPSS
IGAAAITTLL LVGGLTFTAF SIKKDFSFLR SFLTMAGFIA FGAIIASVIC GFSLGVWFSA
LMVLLCAGFI LYDTSNIIHH YPTDRPAGAA LHLFASIATM FWYILRIFMS RN