Gene SeD_A4250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4250 
SymbolglmS 
ID6873438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4097593 
End bp4099422 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content55% 
IMG OID642787180 
Productglucosamine--fructose-6-phosphate aminotransferase 
Protein accessionYP_002217806 
Protein GI198245971 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID[TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGAA TTGTTGGCGC TATCGCGCAG CGTGATGTAG CTGAAATCCT TCTCGAAGGT 
TTACGTCGTC TGGAATACCG CGGATATGAC TCTGCCGGTC TGGCCGTGGT GGATGCAGAA
GGTCATATGA CCCGCCTGCG TCGCCTCGGT AAAGTCCAGA TGCTGGCTCA GGCAGCGGAA
GAACATCCTC TGCATGGCGG CACTGGTATT GCTCACACTC GCTGGGCGAC GCACGGTGAA
CCTTCAGAAG CTAACGCGCA TCCGCATGTT TCTGAACACA TTGTGGTGGT GCATAACGGC
ATCATCGAAA ACCATGAACC GCTGCGTGAA GCGTTAAAAG CGCGTGGCTA TACCTTCGTT
TCTGAAACCG ACACCGAAGT GATTGCACAC CTGGTAAACT GGGAACTGAA ACAGGGCGGT
ACTCTGCGTG AGGCTGTTCT GCGTGCTATC CCGCAACTGC GTGGTGCGTA CGGTACAGTG
ATCATGGATA CCCGTCACCC GGATACCCTA CTGGCGGCAC GTTCTGGTAG CCCGCTGGTG
ATTGGCCTGG GTATGGGCGA AAACTTTATC GCTTCTGACC AGCTGGCGCT GTTGCCAGTG
ACTCGTCGCT TTATCTTCCT TGAAGAGGGC GATATCGCTG AAATCACTCG CCGTTCGGTA
AATATCTTCG ATAACACCGG CGCGGAAGTA AAACGTCAGG ATATCGAATC TAATCTGCAA
TATGACGCGG GCGATAAAGG TATTTACCGC CACTACATGC AGAAAGAGAT CTACGAACAG
CCGAACGCGA TCAAAAACAC CCTTACCGGG CGCATCAGCC ACGGTGAGGT GGATTTAAGC
GAGCTGGGAC CGAACGCCGA TGATCTGTTG TCGAAGGTTG AGCATATTCA GATCCTCGCC
TGCGGTACGT CTTACAACTC CGGTATGGTT TCCCGTTACT GGTTTGAATC GCTGGCAGGT
ATTCCGTGCG ACGTTGAAAT CGCCTCTGAA TTCCGCTATC GCAAATCTGC CGTGCGCCGT
AACAGCCTGA TGATCACGCT CTCCCAGTCT GGCGAAACGG CAGATACCCT GGCTGGCCTG
CGTCTGTCGA AAGAGCTGGG ATATTTGGGC TCTCTGGCCA TTTGTAACGT GCCGGGATCT
TCGCTGGTGC GTGAATCCGA TCTGGCGCTG ATGACCAACG CGGGTACGGA AATTGGCGTA
GCATCTACCA AAGCCTTCAC CACCCAGTTA ACCGTGCTGT TGATGCTGGT GGCGAAACTG
GCGCGTCTGA AAGGTCTGGA TACGTCCATT GAGCATGATA TCGTTCATGG CCTACAGGCG
CTGCCGAGCC GTATTGAGCA GATGCTGTCG CAGGACAAAC GTATCGAAGC CCTGGCGGAA
GATTTCTCTG ACAAACACCA TGCGCTGTTC CTGGGGCGTG GCGATCAATA TCCGATTGCG
CTCGAAGGCG CGCTGAAGCT GAAAGAGATC TCTTACATTC ACGCGGAAGC CTATGCTGCA
GGCGAGCTGA AACACGGGCC GTTGGCGCTG ATTGACGCCG ATATGCCGGT GATTGTGGTG
GCGCCGAACA ACGAACTGCT GGAGAAACTG AAATCCAACA TCGAAGAAGT TCGCGCACGT
GGCGGTCAGT TGTACGTCTT CGCCGATCAG GATGCGGGTT TCGTCAGCAA CGACAACATG
CACATCATCG AGATGCCGCA TGTGGAAGAG GTCATTGCGC CTATCTTCTA CACCGTTCCG
CTGCAACTGC TGGCGTATCA CGTGGCGCTG ATTAAAGGCA CCGACGTTGA CCAGCCGCGT
AACCTGGCGA AATCGGTTAC CGTAGAGTAA
 
Protein sequence
MCGIVGAIAQ RDVAEILLEG LRRLEYRGYD SAGLAVVDAE GHMTRLRRLG KVQMLAQAAE 
EHPLHGGTGI AHTRWATHGE PSEANAHPHV SEHIVVVHNG IIENHEPLRE ALKARGYTFV
SETDTEVIAH LVNWELKQGG TLREAVLRAI PQLRGAYGTV IMDTRHPDTL LAARSGSPLV
IGLGMGENFI ASDQLALLPV TRRFIFLEEG DIAEITRRSV NIFDNTGAEV KRQDIESNLQ
YDAGDKGIYR HYMQKEIYEQ PNAIKNTLTG RISHGEVDLS ELGPNADDLL SKVEHIQILA
CGTSYNSGMV SRYWFESLAG IPCDVEIASE FRYRKSAVRR NSLMITLSQS GETADTLAGL
RLSKELGYLG SLAICNVPGS SLVRESDLAL MTNAGTEIGV ASTKAFTTQL TVLLMLVAKL
ARLKGLDTSI EHDIVHGLQA LPSRIEQMLS QDKRIEALAE DFSDKHHALF LGRGDQYPIA
LEGALKLKEI SYIHAEAYAA GELKHGPLAL IDADMPVIVV APNNELLEKL KSNIEEVRAR
GGQLYVFADQ DAGFVSNDNM HIIEMPHVEE VIAPIFYTVP LQLLAYHVAL IKGTDVDQPR
NLAKSVTVE