Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4241 |
Symbol | phoU |
ID | 6871721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4088560 |
End bp | 4089285 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642787173 |
Product | transcriptional regulator PhoU |
Protein accession | YP_002217799 |
Protein GI | 198244827 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.468604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGTC TGAACCTTAA TAAACATATT TCCGGCCAGT TCAACGCCGA ACTGGAAAGC ATCCGCACTC AGGTAATGAC CATGGGCGGC ATGGTGGAGC AGCAGCTTTC TGACGCTATC ACCGCTATGC ACAACCAGGA CAGCGAGCTG GCGAAGCGCG TGGTAGAAGG CGACCATCAG GTTAATATGA TGGAAGTCGC CATCGATGAG GCCTGCGTGC GTATTATCGC CAAGCGCCAG CCGACGGCGA GCGATCTGCG CCTGGTGATG GCGATTATCA AAACCATCGC CGAACTGGAG CGCATTGGTG ACGTGGCGGA TAAAATCTGC CGTACCGCGC TGGAGAAATT CTCCCAGCAG CACCAGCCGC TGTTGGTGAG TCTGGAGTCA CTGGGCCGCC ACACCGTGCA GATGCTGCAC GACGTGCTGG ATGCGTTCGC GCGCATGGAT CTCGACGAAG CGGTGCGTAT CTATCGTGAA GATAAGAAAG TTGACCAGGA GTACGAAGGC ATCGTGCGTC AGCTGATGAC CTACATGATG GAAGACTCGC GCACCATTCC CAGCGTGCTG ACCGCGTTAT TCTGCGCGCG CTCTATCGAG CGTATCGGTG ACCGTTGCCA GAATATCTGT GAATACATCT TCTACTTCGT GAAGGGGCAA GACTTCCGTC ACGTCGGCGG CGATGAGCTG GATAAGCTGC TGGCGGGGAA AGATCCGAAA GAGTAA
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Protein sequence | MDSLNLNKHI SGQFNAELES IRTQVMTMGG MVEQQLSDAI TAMHNQDSEL AKRVVEGDHQ VNMMEVAIDE ACVRIIAKRQ PTASDLRLVM AIIKTIAELE RIGDVADKIC RTALEKFSQQ HQPLLVSLES LGRHTVQMLH DVLDAFARMD LDEAVRIYRE DKKVDQEYEG IVRQLMTYMM EDSRTIPSVL TALFCARSIE RIGDRCQNIC EYIFYFVKGQ DFRHVGGDEL DKLLAGKDPK E
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