Gene SeD_A4238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4238 
Symbol 
ID6875163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4085833 
End bp4086417 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content55% 
IMG OID642787170 
Producthypothetical protein 
Protein accessionYP_002217796 
Protein GI198245535 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0673986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GGGCACGTAT GTCTGAAACG CTGAATGTGG TTACACTGCT GGGAAGTTTA 
CGCAAAGGTT CCTTTAACGG GATGGTGGCG CGTACGCTGC CTAAAGTCGC GCCGGCAGGA 
ATGACGGTAT CGCCGCTGCC TTCGATCGGG GATATTCCGC TGTATGACGC CGATATCCAG 
CAAGAAGAGG GATTTCCAGC CAGCGTAGAG GCGCTGGCGG AGCAGATTCG CAACGCCGAC 
GGCGTCGTCA TTGTGACGCC GGAATATAAC TATTCCGTTC CCGGCGGCCT GAAGAATGCC 
ATCGACTGGC TATCCCGTCT GCCTGAGCAG CCGCTGGCGG GTAAGCCCGT TCTTATCCAG 
ACCAGCTCAA TGGGGGCGAT TGGCGGCGCG CGCTGCCAGT ATCATCTGCG TCAGATTCTG 
GTGTTCCTTG ATGCGATGGT GATGAATAAA CCGGAGTTTA TGGGCGGCGT GATTCAGAAT 
AAAGTCGATC CGCAGACTGG AGAAGTGGTG GATCAGGGAA CGTTAGATCA TTTGACTGGT 
CAGTTGACCG CATTTGGCGA GTATATTCAG CGCGTTAAAG CGTAA
 
Protein sequence
MKKGARMSET LNVVTLLGSL RKGSFNGMVA RTLPKVAPAG MTVSPLPSIG DIPLYDADIQ 
QEEGFPASVE ALAEQIRNAD GVVIVTPEYN YSVPGGLKNA IDWLSRLPEQ PLAGKPVLIQ 
TSSMGAIGGA RCQYHLRQIL VFLDAMVMNK PEFMGGVIQN KVDPQTGEVV DQGTLDHLTG 
QLTAFGEYIQ RVKA