Gene SeD_A4236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4236 
Symbol 
ID6874258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4083961 
End bp4084920 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content54% 
IMG OID642787168 
ProductDNA-binding transcriptional regulator YidZ 
Protein accessionYP_002217794 
Protein GI198244526 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.253513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT CCCTTACCAA TCTCGACCTT AATTTGCTGT TATGCCTACA GTTACTCATG 
CAGGAGCGCA GCGTCACTAA AGCTGCAAAA CGGATGAACG TAACGCCCTC GGCGGTCAGC 
AAATCGCTGG CGAAACTCCG GGCATGGTTT GACGATCCGC TGTTCGTCAA TACGCCGCTG 
GGCCTGGCGC CGACGCCGCT GATGGTCAGT ATGGAGCAAA GTCTGGCGGA CTGGATGCAG 
ATGGGGAATC AACTGCTTGA TAAACCGCAT CATCAAACGC CGCGCGGTTT AAAATTTGAG 
TTGGCAGCAG AGTCGCCGCT GATGATGATT ATGTTTAATT CACTGTCGCA GCAGATTTAT 
CAGCGCTATC CGCAGGCTAC CATTAAGGTT CGCAACTGGG ATTATGACTC GCTGGAGGCG 
ATTACGCGCG GGGAAGTCGA TATCGGATTT ACCGGACGCG AAAGCCATCC CCGCTCGCGA 
GAATTGCTCA GTCTGTTGCC GCTCGCGATT GATTTTGAGG TGTTGTTTAG CGATTTGCCG 
TGGGTCTGGC TGCGGGAAGA TCATCCGGCA CTGCGTGAAG CGTGGGATCT GGACACTTTT 
CTGCGCTACC CGCATATCAG TATTTGCTGG GAGCAAAGCG ATACCTGGGC GCTGGATGAT 
GTCCTGCAAG AAATGGGACG CAAACGCCAT ATCGCGTTGA GCCTGCCGGG GTTCGAGCAG 
TCACTCTTTA TGGCCGCCCA GCCGGATCAC ACCCTGATAG CAACCGCGCC GCGCTATTGC 
CAGCACTACA ATCAGCTCCA CCAGCTACCG TTAGTGGCGC GCCCCCTGCC TTTTGATGCG 
CAACAGCGGG AAAAGCTGAT GGTGCCGTTT ACCCTATTAT GGCACAAACG TAATAGTCAT 
AATCCCAAGA TTGTGTGGCT ACGACAGGCT ATCAACACGC TCTGCCGTCG CCTTATCTGA
 
Protein sequence
MKKSLTNLDL NLLLCLQLLM QERSVTKAAK RMNVTPSAVS KSLAKLRAWF DDPLFVNTPL 
GLAPTPLMVS MEQSLADWMQ MGNQLLDKPH HQTPRGLKFE LAAESPLMMI MFNSLSQQIY 
QRYPQATIKV RNWDYDSLEA ITRGEVDIGF TGRESHPRSR ELLSLLPLAI DFEVLFSDLP 
WVWLREDHPA LREAWDLDTF LRYPHISICW EQSDTWALDD VLQEMGRKRH IALSLPGFEQ 
SLFMAAQPDH TLIATAPRYC QHYNQLHQLP LVARPLPFDA QQREKLMVPF TLLWHKRNSH 
NPKIVWLRQA INTLCRRLI