Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4235 |
Symbol | |
ID | 6872362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4082805 |
End bp | 4083992 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642787167 |
Product | multidrug efflux system protein MdtL |
Protein accession | YP_002217793 |
Protein GI | 198244845 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.637245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTT TTCTACTGTG TAGTTTTGCC CTGGTTTTAC TCTATCCTGC CGGTATTGAT ATGTATCTGG TCGGTTTACC GCGTATAGCC GCCGATCTGA ACGCCAGCGA GGCGCAGTTG CATATCGCCT TCTCCGTTTA CCTGGCCGGA ATGGCGACGG CCATGCTGTT TGCCGGGAAG ATAGCCGATC AGTCAGGCCG CAAACCGGTC GCGATCGTCG GCGCGATCGT CTTTATGATG GCCTCACTGC TTTGTTCACG GGCGTCGGAA GGCTCGCTAT TTCTGAGTGG GCGTTTTCTT CAGGGAATAG GTGCAGGCGG CTGCTATGTG GTGGCGTTCG CCATTCTGCG CGACACGCTC GACGAGCATC GCCGGGCGAA AGTGCTGTCA TTATTGAATG GGATTACCTG TATTGTGCCG GTACTCGCCC CGGTGGTGGG GCATTTGATT ATGCTTCGTT TCCCCTGGCA AAGTCTGTTC TATACGATGT CCGCGATGGG CATTATTGTG GGCCTGTTAT CACTGTTTAT CCTGCGCGAG ACGCGCCCGG TAAGGCTGGC TCCACGCGAT TTATCACGAT CGTCGCCCGC CGCCGAGTCG CTGATTAACC GTTTTTTCGT TAGTCGACTG GCGATCACCA CCCTTAGCGT GTCGGTGATC CTGACCTTTG TCAATGCCTC TCCAGTGCTG CTGATGGAGG TGATGGGATT TAGCCGTGGC GACTATGCCA TTACCATGGC GCTCACCGCA GGCGTCAGTA TGGTCGTCTC TTTTTCCACC CCTTTTGCGC TTGGGTTATT TAAGCCGCGA ACCTTAATGC TCGTCTCACA GGGGCTGTTT TTGACGGCTG GCGTGACGTT AAGCCTTGCT CATACCAATA CCGTCACACT CTTTGGCCTG ACGCTTATCT GCGCCGGATT CTCGGTTGGT TTTGGCGTCG CGATGAGCCA GGCGCTGGGG CCGTTTTCGC TGCGCGCTGG AGTGGCCAGT TCCACGCTCG GTATCGCGCA GGTTTGCGGT TCATCACTGT GGATTTGGCT GGCGGCAATA CTCGGTATCA GCGCGATGAA TATGCTGATC GGGATTCTGA TTGGTTGTAG CATAGTGAGT ATTCTGCTGA TCTTCTCCGT CACGCCCAAC AGGTCCGTAG CCGAGCATGA AGAAATCCCT TACCAATCTC GACCTTAA
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Protein sequence | MKRFLLCSFA LVLLYPAGID MYLVGLPRIA ADLNASEAQL HIAFSVYLAG MATAMLFAGK IADQSGRKPV AIVGAIVFMM ASLLCSRASE GSLFLSGRFL QGIGAGGCYV VAFAILRDTL DEHRRAKVLS LLNGITCIVP VLAPVVGHLI MLRFPWQSLF YTMSAMGIIV GLLSLFILRE TRPVRLAPRD LSRSSPAAES LINRFFVSRL AITTLSVSVI LTFVNASPVL LMEVMGFSRG DYAITMALTA GVSMVVSFST PFALGLFKPR TLMLVSQGLF LTAGVTLSLA HTNTVTLFGL TLICAGFSVG FGVAMSQALG PFSLRAGVAS STLGIAQVCG SSLWIWLAAI LGISAMNMLI GILIGCSIVS ILLIFSVTPN RSVAEHEEIP YQSRP
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