Gene SeD_A4229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4229 
SymboldnaN 
ID6874352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4075565 
End bp4076665 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content57% 
IMG OID642787161 
ProductDNA polymerase III subunit beta 
Protein accessionYP_002217787 
Protein GI198245644 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA CCGTTGAACG TGAACATTTA TTAAAACCGC TTCAGCAGGT CAGCGGCCCG 
CTGGGCGGTC GTCCTACGCT GCCGATTCTC GGTAACCTGC TCCTCCAGGT AGCGGACGGT
ACGCTTTCTC TGACCGGCAC CGATCTTGAA ATGGAGATGG TCGCGCGCGT TACGCTTTCT
CAGCCGCATG AGCCGGGCGC CACTACCGTG CCGGCGCGGA AATTCTTTGA TATCTGCCGC
GGCCTGCCGG AGGGCGCGGA GATTGCCGTT CAGTTGGAAG GCGATCGGAT GCTGGTGCGT
TCTGGCCGTA GCCGCTTCTC GCTGTCTACG CTGCCTGCCG CCGATTTCCC GAATCTTGAC
GACTGGCAAA GCGAAGTTGA ATTTACGCTG CCGCAGGCCA CGATGAAGCG CCTGATTGAA
GCGACCCAGT TTTCGATGGC TCATCAGGAT GTGCGCTACT ACTTAAACGG TATGCTGTTT
GAAACGGAAG GTAGCGAACT GCGCACTGTC GCGACCGACG GCCACCGCCT GGCGGTGTGC
TCAATGCCGC TGGAAGCGTC TTTACCCAGC CACTCGGTGA TTGTGCCGCG TAAAGGCGTG
ATTGAACTGA TGCGTATGCT CGACGGCGGT GAAAACCCGC TGCGCGTGCA GATCGGCAGT
AATAATATCC GCGCGCACGT TGGCGACTTT ATCTTCACCT CGAAGCTGGT GGATGGTCGC
TTCCCGGATT ACCGTCGCGT TCTGCCGAAG AATCCGGATA AACATCTGGA AGCGGGCTGC
GATATCCTCA AGCAGGCGTT TGCCCGCGCA GCAATCCTCT CGAATGAGAA ATTCCGCGGC
GTGCGTCTGT ACGTCAGTGA GAATCAGCTC AAAATCACCG CCAATAACCC GGAGCAGGAA
GAAGCGGAAG AGATTCTGGA CGTGAGCTAC GGCGGGACGG AGATGGAAAT CGGCTTTAAC
GTCAGTTACG TGCTGGACGT GCTCAATGCG CTGAAGTGCG AAACCGTGCG CATTATGCTG
ACGGATTCCG TATCCAGCGT ACAGATTGAG GATGCGGCGT CACAGAGTGC TGCCTACGTT
GTTATGCCAA TGAGGCTGTA G
 
Protein sequence
MKFTVEREHL LKPLQQVSGP LGGRPTLPIL GNLLLQVADG TLSLTGTDLE MEMVARVTLS 
QPHEPGATTV PARKFFDICR GLPEGAEIAV QLEGDRMLVR SGRSRFSLST LPAADFPNLD
DWQSEVEFTL PQATMKRLIE ATQFSMAHQD VRYYLNGMLF ETEGSELRTV ATDGHRLAVC
SMPLEASLPS HSVIVPRKGV IELMRMLDGG ENPLRVQIGS NNIRAHVGDF IFTSKLVDGR
FPDYRRVLPK NPDKHLEAGC DILKQAFARA AILSNEKFRG VRLYVSENQL KITANNPEQE
EAEEILDVSY GGTEMEIGFN VSYVLDVLNA LKCETVRIML TDSVSSVQIE DAASQSAAYV
VMPMRL