Gene SeD_A4224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4224 
Symbol 
ID6871798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4068402 
End bp4069664 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content47% 
IMG OID642787157 
Productputative permease 
Protein accessionYP_002217783 
Protein GI198242407 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATGG CCCTTACCGC CCCCCCAACC AGGAAAAGAT TTTTAATCGT TGCCTGTCTG 
TTTATTGGAA TATTTATTGC TTATCTCGAT CGCGTTAATG TTTCGGTATT AGCCGCGAAT 
GAACCCTTCT TAGCCTATAT GGGTATTGAA GGTATGCCAT TGCAAATCGG CATGATGATG 
ACCGTCTTTC TGGCCGCTTA TGGTATCGCT AACGTTGTAT TATCACCGCT TGGTGATTAT 
CTCGGCCCCA GAAAAGCAAT GATGCTTTGT ATTCTGATCT GGACTATCGC TTTAATGATT 
GGCGGAGTCG CTACATCATT CGCTCTAATT ATTATTTGCC GTATATTACT GGGCATCGGA 
GAGGGATTTT ATTATCCACT GCAAAGCGTA TTTATTAAAA ACTGGTTCCC GAAGCAGGAA 
CGCGGCAGAG CAAACGCGGC GTGGATCGTC GGCCAGTCAG TCGCTCCCGC CATTGCGATG 
CCTTTTTTCA CCTGGTGGAT AGGCACCCAC GGCTGGCGCT CCAACTTCTT TTTATGCGCC 
GCTCTTGGGT TAATCCCACT CTGGCTACTT TGGCGATATG TTGCTGATAA ACCAGAACAA 
CATAAAAGTA TCAGCGAGCA GGAACTGGCT TATATCAAAG CCGGGCAGGA AACGGAAAGC 
GCAGGCAGCA GCGAAAGTTT TATGTTGCGG GTAAAACCGG TGATTACCAA CTACAGCTAT 
TGGTTGCTGG TGCTGTGGTA TCTGTGTCTG CAATGCCTGT ACTGGGGGAT GATTACCTGG 
CTGCCGACCT ATCTAAAATC AGCCAGAGGG TTCAGTTGGG CGGAAATGGG CTGGCTGGCG 
TCGCTTCCCT TTGTCCTGTC GATATTTGCC AAAGCGGCCG CAGGCGTCTT CGTCGATAAA 
ATAGGACGCA GCGCCCCCAT ATTAATGGTA TTAATGTTTT TCGCTGGCGT CAGTATCTAT 
TTCGGCACCA TAACCGAACA TAAATATATG TCAGCGGTAC TCCTCTCCTT TGCTGTTGCT 
TTCTGTACGA TGGGTACACC CGTTGCCTGG ACGTTATTAC AGGGAATGAT ACCCGGAAAA 
TCTATTTCCG CCGCCAGCGG CGTAATGAAC GGCGTCGCCA ATGGACTCTC TTCATTATCC 
CCCGTATTTA TCGGCTTATT TATTTCTATC ACTGGAACTT ATACCGGCGG CTTACTATGC 
CTGGTTTTTA TCAGCGCTAT CGCCGTGGTA TCGGCATTAA TCTTAACGAT TAAAAAATAT 
TAA
 
Protein sequence
MSMALTAPPT RKRFLIVACL FIGIFIAYLD RVNVSVLAAN EPFLAYMGIE GMPLQIGMMM 
TVFLAAYGIA NVVLSPLGDY LGPRKAMMLC ILIWTIALMI GGVATSFALI IICRILLGIG 
EGFYYPLQSV FIKNWFPKQE RGRANAAWIV GQSVAPAIAM PFFTWWIGTH GWRSNFFLCA 
ALGLIPLWLL WRYVADKPEQ HKSISEQELA YIKAGQETES AGSSESFMLR VKPVITNYSY 
WLLVLWYLCL QCLYWGMITW LPTYLKSARG FSWAEMGWLA SLPFVLSIFA KAAAGVFVDK 
IGRSAPILMV LMFFAGVSIY FGTITEHKYM SAVLLSFAVA FCTMGTPVAW TLLQGMIPGK 
SISAASGVMN GVANGLSSLS PVFIGLFISI TGTYTGGLLC LVFISAIAVV SALILTIKKY