Gene SeD_A4223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4223 
Symbol 
ID6871108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4067252 
End bp4068097 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content53% 
IMG OID642787156 
Productsugar phosphatase 
Protein accessionYP_002217782 
Protein GI198242544 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCA AACTTATTGC TATCGACATG GATGGCACCC TTCTGCTGCC CGATCACACC 
ATTTCTCCGG CGGTTAAAAA CGCGATTGCC GCTGCGCGTG AAAAAGGGGT AAATGTGGTG
CTGACCACAG GCCGTCCGTA TGCGGGTGTG CACAGTTACC TGAAAGAACT TCACATGGAA
CAGCCCGGCG ATTATTGCAT CACCTATAAC GGGGCGCTGG TGCAGAAAGC AGGGGACGGC
AGTACGGTTG CGCAAACGGC GCTCAGCTAT GATGACTACC GTTACCTGGA AAAACTGTCC
CGTGAGGTGG GTTCTCACTT CCACGCATTA GACCGAAATA CGCTTTATAC CGCTAACCGC
GATATCAGCT ACTACACGGT GCATGAGTCG TATGTGGCGA CCATTCCGCT GGTATTTTGT
GAAGCGGAGA AGATGGACCC GAACACCCAG CTCCTGAAAG TTATGATGAT CGATGAGCCT
GCCGTTCTCG ACCGGGCGAT TGCGCGTATA CCGGCAGAGG TGAAGGAAAA GTACACCGTG
CTGAAAAGTG CGCCGTACTT CCTTGAAATC CTCGATAAAC GGGTTAATAA AGGCACTGGC
GTAAAATCAC TGGCCGAGGC GCTGGGTATT AAGCCAGAGG AGGTGATGGC GATTGGCGAT
CAGGAAAACG ACATTGCGAT GATCGAATAC GCCGGCATGG GCGTGGCAAT GGACAACGCC
ATTCCGTCGG TCAAAGAGGT GGCTAACTTT GTGACTAAAT CGAACCTTGA AGATGGTGTT
GCCTGGGCGA TTGAAAAATT TGTGCTGAAC CCCGATCACT CATCCGGCCA TTTCCCCGCC
CGATAA
 
Protein sequence
MAIKLIAIDM DGTLLLPDHT ISPAVKNAIA AAREKGVNVV LTTGRPYAGV HSYLKELHME 
QPGDYCITYN GALVQKAGDG STVAQTALSY DDYRYLEKLS REVGSHFHAL DRNTLYTANR
DISYYTVHES YVATIPLVFC EAEKMDPNTQ LLKVMMIDEP AVLDRAIARI PAEVKEKYTV
LKSAPYFLEI LDKRVNKGTG VKSLAEALGI KPEEVMAIGD QENDIAMIEY AGMGVAMDNA
IPSVKEVANF VTKSNLEDGV AWAIEKFVLN PDHSSGHFPA R