Gene SeD_A4221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4221 
Symbol 
ID6873080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4065427 
End bp4066305 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content56% 
IMG OID642787154 
Product2-dehydro-3-deoxygalactonokinase 
Protein accessionYP_002217780 
Protein GI198246094 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3734] 2-keto-3-deoxy-galactonokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTC GCTACATCGC AATTGACTGG GGATCGACCA ATCTGCGCGC CTGGCTTTAC 
CAGGGCGACA AATGCCTGGA GAGCAGGCAA TCAGAAGCAG GCGTTACACG CCTGAACGGT
AAATCTCCTG ACGCGGTGTT AGCAGAAGTC ACAACACACT GGCGCGACAG CGCCACCCCA
GTGATAATGG CGGGCATGAT CGGCAGTAAC GTAGGCTGGC AAAATGCGCC TTATCTGCCG
GTTCCCGCCC TGTTCTCCGC TATTGGCGAA CAGTTAACCG CCGTTGGCGA CAACATCTGG
ATCATTCCCG GATTGTGTGT CTCACGCGAG GATAACCACA ACGTGATGCG CGGTGAAGAG
ACGCAACTAC TTGGCGCCCG CGAACTTTCT CCTTCTTCTG TCTATGTCAT GCCCGGCACG
CATTGCAAAT GGGTACAGAC TGATACGCAA CAAATTCATG ATTTTCGTAC TGTGATGACA
GGCGAACTCC ATCACTTGTT GCTGCGTCAC TCGCTGGTCG GGGCTGGTTT GCCGGAACAG
GAAGTTTCTG GCGACGCCTA TGCCGCGGGG CTGGAGCGCG GTCTTAATTC TCCTGCCGTC
CTGCCTTCTC TTTTTGAGGT TCGCGCCTCG CACGTGTTGG GACACCTTGC GCGTGAGCAG
GTCAGCGACT TCCTCTCCGG CCTGTTGATT GGCGCGGAAG TCGCCAGCAT GAGCGAATCC
TTCGCGGCGC AACAGGCTAT CACTCTCGTC GCTGGACCCG CGCTGATCTC ACGTTACCAA
CAGGCGTTTA GTGCTATTGG GCGTGATGTT TCAACCGTGG ATGGCGATAT GGCATTTCAG
GCTGGAATAA GGAGCATCGC TCATGCAGTG GCAAACTAA
 
Protein sequence
MTARYIAIDW GSTNLRAWLY QGDKCLESRQ SEAGVTRLNG KSPDAVLAEV TTHWRDSATP 
VIMAGMIGSN VGWQNAPYLP VPALFSAIGE QLTAVGDNIW IIPGLCVSRE DNHNVMRGEE
TQLLGARELS PSSVYVMPGT HCKWVQTDTQ QIHDFRTVMT GELHHLLLRH SLVGAGLPEQ
EVSGDAYAAG LERGLNSPAV LPSLFEVRAS HVLGHLAREQ VSDFLSGLLI GAEVASMSES
FAAQQAITLV AGPALISRYQ QAFSAIGRDV STVDGDMAFQ AGIRSIAHAV AN