Gene SeD_A4220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4220 
Symbol 
ID6874196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4064826 
End bp4065443 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content59% 
IMG OID642787153 
Product2-dehydro-3-deoxy-6-phosphogalactonate aldolase 
Protein accessionYP_002217779 
Protein GI198243740 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTGGC AAACTAATCT CCCTCTCATC GCTATCTTAC GCGGTATTAC GCCCGATGAT 
GCCCTGGCGC ACGTTGGCGC GGTGGTGGAT GCGGGATTTG ACGCTATAGA AATTCCGCTT
AACTCCCCAC AGTGGGAAAA AAGCATTTCT TTCGTGGTGA AGGCGTATGG CGGCAGGGCG
CTTATTGGCG CTGGTACCGT ACTGAAACCG GAACAGGTAG ACCAGCTTGC CGGGATGGGC
TGCAAGCTGA TCGTCACGCC GAATATCCAA CCGGAGGTGA TCCGCCGGGC GGTGAGCTAT
GGCATGACCG TGTGTCCGGG CTGCGCCACG GCAACGGAAG CCTTTTCTGC GCTGGATGCA
GGCGCACAGG CGTTAAAAAT TTTCCCGTCG TCGGCGTTTG GTCCGGGCTA CATCAGCGCG
CTGAAAGCGG TACTTCCGCC GGATGTTCCG CTATTTGCCG TCGGCGGCGT GACGCCGGAA
AACCTGGCGC AATGGATTAA AGCCGGCTGT GTGGGCGCGG GATTGGGTAG CGATCTCTAT
CGCGCCGGGC AATCCGTTGA ACGCACCGCG CAGCAGGCTG CGGCATTTGT TAATGCGTAT
CGAGAGGCAG TGAAATGA
 
Protein sequence
MQWQTNLPLI AILRGITPDD ALAHVGAVVD AGFDAIEIPL NSPQWEKSIS FVVKAYGGRA 
LIGAGTVLKP EQVDQLAGMG CKLIVTPNIQ PEVIRRAVSY GMTVCPGCAT ATEAFSALDA
GAQALKIFPS SAFGPGYISA LKAVLPPDVP LFAVGGVTPE NLAQWIKAGC VGAGLGSDLY
RAGQSVERTA QQAAAFVNAY REAVK