Gene SeD_A4219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4219 
Symbol 
ID6873538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4063681 
End bp4064829 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content55% 
IMG OID642787152 
Productgalactonate dehydratase 
Protein accessionYP_002217778 
Protein GI198244787 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA CTCACATCAC CACGTACCGT TTACCTCCAC GTTGGATGTT CCTGAAAATC 
GAAACGGATG AAGGCGTGGT TGGCTGGGGA GAGCCGGTCA TTGAAGGTCG GGCACGTACT
GTAGAGGCGG CAGTACATGA GTTTGCCGAC TACCTGATAG GGAAAGATCC GGCGCGTATC
AACGACCTAT GGCAGGTAAT GTACCGGGCC GGTTTTTATC GCGGCGGCCC GATTATGATG
AGCGCCATCG CCGGTATTGA CCAGGCATTG TGGGATATCA AAGGCAAGGT GTTGAATGCG
CCGGTCTGGC AGCTCATGGG CGGCCTGGTG CGCGACAAAA TCAAGGCCTA TAGCTGGGTG
GGTGGCGATC GTCCGGCAGA CGTCATTGAC GGTATTGAAA AATTGCGCGG TATTGGTTTT
GACACCTTCA AGCTGAACGG CTGTGAAGAG ATGGGCGTGA TTGATAACTC CCGTGCGGTG
GATGCGGCGG TCAATACCGT GGCGCAAATC CGCGAAGCTT TCGGCAGTGA AATTGAGTTT
GGGCTCGACT TCCACGGTCG CGTTAGCGCG CCGATGGCGA AGGTGCTGAT TAAAGAACTG
GAACCCTATC GCCCGCTGTT TATTGAAGAG CCGGTGCTGG CGGAACAGGC GGAATATTAT
CCGCGCCTGG CAGCGCAAAC GCATATTCCG ATTGCCGCAG GCGAACGTAT GTTCTCGCGT
TTTGAATTTA AACGCGTGCT GGACGCGGGC GGGTTGGCGA TTCTACAGCC GGATTTATCC
CACGCGGGCG GCATTACCGA ATGCTATAAA ATCGCCGGAA TGGCGGAAGC ATATGATGTG
GCGCTGGCGC CGCATTGCCC GCTGGGTCCA ATCGCCCTGG CTGCCTGCCT GCATATCGAT
TTTGTTTCGC GCAACGCGGT ATTCCAGGAG CAGAGCATGG GCATTCACTA TAACAAGGGC
GCGGAGCTGC TCGACTTTGT GAAAAACAAA GAAGACTTCA GCATGGACGG CGGCTTCTTT
AAACCCTTAA CCAAACCGGG TCTTGGCGTA GACATTGACG AGGCCAGGGT GATTGAACTT
AGCAAAAGCG CGCCGGACTG GCGTAATCCG TTGTGGCGGC ACGCTGACGG ATCGGTAGCC
GAGTGGTGA
 
Protein sequence
MKITHITTYR LPPRWMFLKI ETDEGVVGWG EPVIEGRART VEAAVHEFAD YLIGKDPARI 
NDLWQVMYRA GFYRGGPIMM SAIAGIDQAL WDIKGKVLNA PVWQLMGGLV RDKIKAYSWV
GGDRPADVID GIEKLRGIGF DTFKLNGCEE MGVIDNSRAV DAAVNTVAQI REAFGSEIEF
GLDFHGRVSA PMAKVLIKEL EPYRPLFIEE PVLAEQAEYY PRLAAQTHIP IAAGERMFSR
FEFKRVLDAG GLAILQPDLS HAGGITECYK IAGMAEAYDV ALAPHCPLGP IALAACLHID
FVSRNAVFQE QSMGIHYNKG AELLDFVKNK EDFSMDGGFF KPLTKPGLGV DIDEARVIEL
SKSAPDWRNP LWRHADGSVA EW