Gene SeD_A4218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4218 
Symbol 
ID6873588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4062259 
End bp4063557 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content54% 
IMG OID642787151 
Productd-galactonate transporter 
Protein accessionYP_002217777 
Protein GI198244170 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00881] phosphoglycerate transporter family protein
[TIGR00893] d-galactonate transporter 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGG ATATTTCAGT TACAGCAGCA CAGCCGGGGC GTCGCCGCTA TCTGACGCTG 
GTGATGATCT TTATTACCGT GGTGATTTGC TACGTCGATC GCGCCAACCT TGCCGTGGCT
TCCATGCATA TTCAAAAAGA ATTCGGCATT ACCAAAGCGG AAATGGGCTA TGTCTTCTCC
GCTTTTGCCT GGCTCTATAC GTTATGCCAG ATCCCTGGCG GCTGGTTTCT CGACCGTATT
GGGTCCCGGC TGACCTATTT TATCGCTATC TTCGGCTGGT CAGTCGCGAC GCTATTGCAG
GGGTTTGCGA CGGGACTATT GTCGCTTATC GGCCTGCGCG CTATTACCGG GATTTTCGAG
GCACCAGCCT TTCCGGCAAA TAACCGGATG GTCACTAGCT GGTTTCCGGA GCATGAGCGC
GCATCCGCAG TCGGGTTCTA CACCTCCGGA CAGTTCGTCG GACTGGCATT CCTTACGCCG
CTGCTGATCT GGATTCAGGA AATGCTGAGC TGGCACTGGG TCTTTATCGT CACCGGCGGT
ATCGGGATTA TCTGGTCATT GGTCTGGTTT AAGGTTTATC AACCGCCGCG TTTGACGAAA
AGCCTTAGCC AGGCGGAGCT GGAGTATATT CGCGATGGCG GCGGTCTGGT GGATGGCGAT
GCGCCAGCGA AAAAAGAGGC CCGCCAGCCG TTGACGAAAG CCGACTGGAA ACTGGTGTTC
CATCGTAAGC TGGTGGGCGT CTACCTCGGT CAGTTCGCCG TAAATTCTAC GCTATGGTTC
TTTCTGACCT GGTTCCCTAA TTATCTGACC CAGGAAAAAG GCATTACCGC GCTAAAAGCG
GGCTTTATGA CGACCGTACC GTTCCTGGCT GCCTTTTTTG GCGTACTGCT CTCCGGCTGG
CTGGCGGATA AACTGGTGAA AAAAGGCTTC TCGCTGGGCG TGGCGCGCAA AACGCCGATT
ATTTGCGGTT TGCTCATCTC CACATGCATT ATGGGCGCTA ACTACACTAA CGATCCGTTG
TGGATTATGG CGTTGATGGC GATAGCTTTC TTCGGCAACG GATTTGCGTC CATTACCTGG
TCGTTAATCT CTTCCCTTGC GCCGATGCGG TTGATTGGCC TTACCGGCGG TATGTTTAAC
TTTATCGGTG GGTTGGGCGG GATTAGCGTA CCGTTAGTGA TTGGTTATCT GGCGCAAAGC
TACGGTTTTG CTCCGGCGCT GGTCTATATC TCCGTTGTGG CCCTGCTGGG CGCGCTGTCT
TACATCCTGT TAGTGGGCGA TGTGAAACGC GTCGGATAA
 
Protein sequence
MTMDISVTAA QPGRRRYLTL VMIFITVVIC YVDRANLAVA SMHIQKEFGI TKAEMGYVFS 
AFAWLYTLCQ IPGGWFLDRI GSRLTYFIAI FGWSVATLLQ GFATGLLSLI GLRAITGIFE
APAFPANNRM VTSWFPEHER ASAVGFYTSG QFVGLAFLTP LLIWIQEMLS WHWVFIVTGG
IGIIWSLVWF KVYQPPRLTK SLSQAELEYI RDGGGLVDGD APAKKEARQP LTKADWKLVF
HRKLVGVYLG QFAVNSTLWF FLTWFPNYLT QEKGITALKA GFMTTVPFLA AFFGVLLSGW
LADKLVKKGF SLGVARKTPI ICGLLISTCI MGANYTNDPL WIMALMAIAF FGNGFASITW
SLISSLAPMR LIGLTGGMFN FIGGLGGISV PLVIGYLAQS YGFAPALVYI SVVALLGALS
YILLVGDVKR VG