Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4216 |
Symbol | torS |
ID | 6875295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4059546 |
End bp | 4062233 |
Gene Length | 2688 bp |
Protein Length | 895 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642787150 |
Product | hybrid sensory histidine kinase TorS |
Protein accession | YP_002217776 |
Protein GI | 198244217 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR02956] TMAO reductase sytem sensor TorS |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCGC TCACCCTGCT CAGCACCGTG ATCGGCTGGA TAAGCCTGCG CGTCATTAGT CAGGTGGAGC AAACCAATAC GCAAGCGCTG CTCCCGACGA TGAATATGGC CAGGCAGTTA AGCGAAGCCA GCGCTTACGA GCTCTTTTCC GCGCAAAATC TGACCAATGC CGACAGCGAG GGCGTTTGGC TGGCGCAGGG GAAGATGCTG AAAGCGCAAA GCCTTAAAAT TAACCATCTT TTGCAGGCAT TAAGCGAGCA GGGATTTAAT ACCTCGGCCA TCGCCCGGCA AGAAAAAGAG ATTGCGCAAA CGCTTGGGCA ACAGGGAACG CTGGTCGGTG AAATTCTCAC GCTGCGCGCA CAGCAACAGC AGTTAAGCCG CCAGATTGCG GAGGCGGCGG AAAGCATTGC CGCCCAGGCT CACGGTCAGG CCAATAATGC AGCGACATCT GCGGGCGCCA CCCAGGCCGG TATTTACGAT CTTATCGAAA GCGGTAAAGG GGACCAGGCT GAACGCGCGC TTGACCGGCT GATTGATATC GACCTTGAGT ATGTGAATCA GATGAATGAG TTGCGGGTCA ATGCCCTGCG GTTTAAGCAG CTCACTGTGA CCTTAAAAGA CGCGCAAGGG CTGAGCGATG CCGAGGAAAC CGATGAAAAA CTTAATCAGT TGGTTAAAAT TTTATCCCGC CGCCAGCAGC GTATAGAAGA TCCTACCGTT CGCGCCCAAA TCGCCGACGC GCTGGAGAAA ATAAACCAGT ACACCACACT GGTTACCCTG TTTCGTAAGG AAAACGCCAT CCGCGACCAG CTTCAAACGC TTATGGCCAA TAACCTCTTT CAGTTTACCC GCTTCAGTAC GGAAGTATCG CAGTTGGTGA ACGCCATCGA AAAACGAAAC GAGGCTGGGT TAGCGCGTCT TACACACGCC AGTCAGCGTG GGCAAATAGG GTTAGTGATC TTAGGCATCC TGGCGCTGTG CTCATTAAGT TTTATTCTTT GGCGAGTGGT TTACCGTTCC GTATCCCGCC CGCTGGCGCA ACAAACGCAG GCCTTACAGC GGCTACTGGA GGGCGATATT GACTCGCCGT TTCCGGAGGC GGCTGGCGTC AGCGAACTGG ATACCATCAG CCGTCTGATG GAAGCGTTTC GCGCCAACGT GCGCAAATTG AACCGCCATC GTGAGGATTT GGCGGAACAG GTGCGATCGC AAACGGCGGA GCTTCATGCG CTGGTGCTGG AACACCGGCA GGCGCGCGCC GAAGCGGAAA AGGCCAACGA GGCGAAATCG ACGTTCCTTG CCGCCATGAG CCATGAAATT CGCACGCCGC TTTACGGCAT TCTCGGTACG GTACAATTGC TGGCCGATAA ACCGCTCATG GCAAACTACC GCGACGATTT ACAGGCCATT AATGATTCAG GCGAATCGCT ACTGGCGATT CTTAACGATA TTCTTGATTA CTCGGCGATT GAAGTAGGCG GCACCAACGT TTCCATTAGC GAGGAACCGT TTGAACCGCG ACAATTGTTG AATAGCGCGC TGCATTTAAT GCACAGCCGC GTGCAGGTGG CGCTCATCAC CGACTTTAGC GAGCAACTCC CTTCCACGCT ACAAGGCGAT CCGCGCCGGA TACGTCAAAT TGTGATTAAT CTTTTAAGTA ATGCGGCGAA ATTTACCGAT CGCGGCAGCA TAGTGCTGCG CACGTTTTGC GACGATCAGA GCTGGTTTAT TGAGGTTGAA GATACCGGAT GCGGTATCCC TGAAGCGAAG CTGACGGCTA TTTTCAAACC GTTTGTGCAG GCGACAGGAC GCCGGGGCGG GACGGGCCTG GGGCTGGCTA TCAGCGCCAG CCTGGCAGAG GCGATGGGCG GGACGCTAAC CGTCACCAGT ACGCTTCATG TTGGCAGTTG TTTTCGTTTA CAACTGCCGG TTTGCCACTC CAAACCCGCA AGTAAAAGTG CGTTCAGGGA ACCGATAAAT CTTAACGGAC TACGCTTGTT GCTGATTGAA GATAATATGC TGACGCAGCG TATTACCGCT GAAATGCTCA CGGGTAAAGG GGTGAAAGTC TCAGTAGCTG AAAGCGCGAA TGACGCGCTA CGCTGTTTAG CCGAAGGCGA GTCCTTTGAT GTCGCGCTGG TGGATTTTGA TTTACCGGAT TATGACGGCT TAACCCTGGC GCAGCAGTTG ATGAGCCTGT ATCCCGCCAT GAAACGCATT GGTTTTAGCG CGCATGTGAT AGACGATAAT CTTCGTCAGC GTACCGCCGG TCTTTTCTGC GGGATTATTC AAAAACCCGT TCCCCGCGAG GAGCTTTACC GCATGATAGC GCACTATTTA CAGGGCAAAT CTCACAACGC GCGGGTGATG TTGAATGAAC ATCAGCTTGC CGGCGATATG GCGTCTGTCG GCCCGGAAAA ACTCCGGCAA TGGGTCGCCT TATTCAAAGA CAGCGCGCTG CCTTTAGTCG AGGAGATCGA GGCGGCGCGC GCCATGAATG ACGACGTTAA CATTAAGCGG CTGGCGCATA AATTAAAAAG CGGCTGCGCC AGCCTGGGGA TGACGCAGGC AACCGAAGCC TGTCGGGAGC TGGAATTGCA ACCGCTAAGC GATATAGATA TTAAAACTAT CGTGACGCAG GGAGTGACGG CGCTCGACGC ATGGATAGCC GGTCATCCTT CGCCATAA
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Protein sequence | MAALTLLSTV IGWISLRVIS QVEQTNTQAL LPTMNMARQL SEASAYELFS AQNLTNADSE GVWLAQGKML KAQSLKINHL LQALSEQGFN TSAIARQEKE IAQTLGQQGT LVGEILTLRA QQQQLSRQIA EAAESIAAQA HGQANNAATS AGATQAGIYD LIESGKGDQA ERALDRLIDI DLEYVNQMNE LRVNALRFKQ LTVTLKDAQG LSDAEETDEK LNQLVKILSR RQQRIEDPTV RAQIADALEK INQYTTLVTL FRKENAIRDQ LQTLMANNLF QFTRFSTEVS QLVNAIEKRN EAGLARLTHA SQRGQIGLVI LGILALCSLS FILWRVVYRS VSRPLAQQTQ ALQRLLEGDI DSPFPEAAGV SELDTISRLM EAFRANVRKL NRHREDLAEQ VRSQTAELHA LVLEHRQARA EAEKANEAKS TFLAAMSHEI RTPLYGILGT VQLLADKPLM ANYRDDLQAI NDSGESLLAI LNDILDYSAI EVGGTNVSIS EEPFEPRQLL NSALHLMHSR VQVALITDFS EQLPSTLQGD PRRIRQIVIN LLSNAAKFTD RGSIVLRTFC DDQSWFIEVE DTGCGIPEAK LTAIFKPFVQ ATGRRGGTGL GLAISASLAE AMGGTLTVTS TLHVGSCFRL QLPVCHSKPA SKSAFREPIN LNGLRLLLIE DNMLTQRITA EMLTGKGVKV SVAESANDAL RCLAEGESFD VALVDFDLPD YDGLTLAQQL MSLYPAMKRI GFSAHVIDDN LRQRTAGLFC GIIQKPVPRE ELYRMIAHYL QGKSHNARVM LNEHQLAGDM ASVGPEKLRQ WVALFKDSAL PLVEEIEAAR AMNDDVNIKR LAHKLKSGCA SLGMTQATEA CRELELQPLS DIDIKTIVTQ GVTALDAWIA GHPSP
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