| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4212 |
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| Symbol | torA |
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| ID | 6873216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 4053857 |
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| End bp | 4056409 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642787145 |
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| Product | trimethylamine-N-oxide reductase TorA |
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| Protein accession | YP_002217771 |
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| Protein GI | 198242214 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02164] trimethylamine-N-oxide reductase TorA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA AGGACGCGCT ACACGTCTCT CGTCGACGTT TTCTGGCGCA GCTTGGCGGT
TTGACGGTGG CAGGAATGCT GGGGCCGTCA CTGCTGACGC CCCGTAGCGC CCGCGCAGCG
GATGCCGTTG CGCCAGGTGC CGCGACGAAA GAGGGTATCC TGACCGGTTC TCACTGGGGG
GCGATTCGCG CCACGGTGGT TGACGGTCGA TTTGTGGCGG CAAAACCGTT TGAACAGGAT
AAATACCCGT CCAAAATGAT CGCCGGTCTG CCCGATCACG TCCACAACGC GGCGCGTATC
CGTTATCCGA TGGTGCGTGT CGACTGGATG CGCAAAGGTC ATCAAAGCGA CACCTCTCAG
CGCGGCGATA ATCGTTTTGT GCGCGTCTCC TGGGATGAAG CGCTGGATCT GTTCTATCAG
GAACTGGAGC GGGTGCAAAA AACCTACGGG CCGAGCGCGT TACTGACGGC GAGCGGCTGG
CAATCTACCG GCATGTTCCA TAACGCCTCC GGGATGCTGG CGCGCGCGAT TGCGCTACAT
GGCAATAGCG TTAGCACGGG AGGGGACTAT TCGACCGGCG CGGCGCAGGT GATTCTGCCG
CGCGTGGTGG GTTCAATGGA AGTGTACGAG CAGCAAACGT CATGGCCTCT GGTTTTACAG
AACAGTAAAA CGATTGTGCT ATGGGGTTCT GATATGGTGA AAAACCAGCA GGCAAACTGG
TGGTGCCCGG ATCACGATGT CTATCAGTAC TATGAACAAT TAAAAGAGAA GGTTGCCAGC
GGCGCTATCT CGGTCATCAG CATCGACCCG GTCGTCACCT CCACGCACGA TTATCTGGGG
CGCGATAAGG TCAAACATAT CGCCATTAAC CCGCAGACGG ATGTCCCGTT ACAACTGGCG
CTGGCGCATA CCCTGTACAG CGAGAAACTG TACGATAAAA ATTTCCTCGA TAACTACTGC
GTCGGTTTTG ACCAGTTCCT GCCCTATTTG CTGGGCGAGA AAGATGGACA GCCCAAAGAT
GCCGCCTGGG CGGAAAAACT GTGCGGTATT GACGCCGACA CCATCCGCGC GTTGGCGCGG
CAGATGGCGG GCGACAGAAC GCAAATCATC GCTGGCTGGT GCGTACAACG TATGCAGCAT
GGCGAACAGT GGTCATGGAT GGTCGTCGTG CTGGCGGCAA TGCTGGGACA GATTGGTTTA
CCGGGCGGCG GCTTTGGTTT TGGCTGGCAC TACAACGGCG CCGGGACGCC TGGCCGTAAA
GGGATCATTT TAAGCGGCTT TTCCGGTTCG ACGACCGTTC CGCCAGTGCA CGACAGCACG
GATTACAAAG GCTACAGCAG CACCATTCCT ATTGCGCGTT TTATGGATGC CATCCTTGAA
CCGGGCAAGG ACATTAACTG GAACGGCAAA TCGGTTAAAT TACCGCCGCT GAAGATGTGC
GTGTTCGCCG GAACCAACCC GTTCCACCGA CACCAACAAA TTAACCGCAT AATTGAAGGC
TGGCGCAAGC TGGAAACGGT CATCGCTATT GATAACCAGT GGACGTCGAC CTGCCGCTTT
GCGGATATCG TTTTGCCGGC TACCACCCAA TTTGAGCGTA ACGACCTCGA TCAGTTCGGC
AACCACTCTA ACCGCGGCAT TATCGCCATG AAACAGGTGG TGTCGCCGCA GTTTGAAGCG
CGTAACGACT TTGATATTTT CCGCGATCTC TGCCGACGCT TTAACCGTGA AGCGGCATTC
ACGGAAGGTC TTGATGAAAT GGGCTGGCTG AAACGCATCT GGCAGGAAGG GAGCCAGCAG
GGAAAAGGTC GCGGTATCCA CTTACCGACT TTCGAGGTGT TCTGGAATCA ACAGGAGTAC
ATCGAGTTTG ATCATCCGCA GATGTTTGTG CGCCATCAGG CTTTCCGTGA AGATCCGGAC
CTGGAGCCGT TGGGCACGCC AAGCGGTTTG ATCGAGATTT ACTCCAAAAC GATCGCCGAC
ATGCAATACG ACGATTGTCA GGGCCATCCC ATGTGGTTCG AAAAAATCGA ACGCTCGCAT
GGCGGGCCGG GATCGCAGCG CTGGCCGCTG CACTTACAGT CCGTCCACCC TGATTTCCGT
CTGCATTCCC AACTGTGCGA GTCGGAAACG CTGCGTCAGC AATATGCCGT TGGCGGCAAG
GAGCCGGTCT TTATTAACCC ACAGGATGCC AGCGCGCGCG GGATCCGCAA CGGTGACATC
GTGCGGGTAT TCAATGCACG CGGGCAGGTA CTGGCGGGAG CGGTAGTTTC CGATCGCTAT
GCGCCGGGCG TGGCGCGAAT TCATGAAGGC GCCTGGTACG ATCCTGATAA AGGCGGCGAT
CTCAACGCGT TATGTAAGTA CGGCAACCCT AACGTATTAA CACTGGATAT CGGTACATCA
CAGCTCGCGC AGGCGACCAG CGCGCATACG ACGCTGGTGG AAATTGAAAA ATATACCGGC
CCTATGGATA ACGTCACGGC GTTTAACGGT CCGGTCGAGA TGGTCGCGCA GTGTGAATAT
GTACCCGCAT CGCAGGGGAA TCCGCATGAT TAA
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| Protein sequence | MKNKDALHVS RRRFLAQLGG LTVAGMLGPS LLTPRSARAA DAVAPGAATK EGILTGSHWG
AIRATVVDGR FVAAKPFEQD KYPSKMIAGL PDHVHNAARI RYPMVRVDWM RKGHQSDTSQ
RGDNRFVRVS WDEALDLFYQ ELERVQKTYG PSALLTASGW QSTGMFHNAS GMLARAIALH
GNSVSTGGDY STGAAQVILP RVVGSMEVYE QQTSWPLVLQ NSKTIVLWGS DMVKNQQANW
WCPDHDVYQY YEQLKEKVAS GAISVISIDP VVTSTHDYLG RDKVKHIAIN PQTDVPLQLA
LAHTLYSEKL YDKNFLDNYC VGFDQFLPYL LGEKDGQPKD AAWAEKLCGI DADTIRALAR
QMAGDRTQII AGWCVQRMQH GEQWSWMVVV LAAMLGQIGL PGGGFGFGWH YNGAGTPGRK
GIILSGFSGS TTVPPVHDST DYKGYSSTIP IARFMDAILE PGKDINWNGK SVKLPPLKMC
VFAGTNPFHR HQQINRIIEG WRKLETVIAI DNQWTSTCRF ADIVLPATTQ FERNDLDQFG
NHSNRGIIAM KQVVSPQFEA RNDFDIFRDL CRRFNREAAF TEGLDEMGWL KRIWQEGSQQ
GKGRGIHLPT FEVFWNQQEY IEFDHPQMFV RHQAFREDPD LEPLGTPSGL IEIYSKTIAD
MQYDDCQGHP MWFEKIERSH GGPGSQRWPL HLQSVHPDFR LHSQLCESET LRQQYAVGGK
EPVFINPQDA SARGIRNGDI VRVFNARGQV LAGAVVSDRY APGVARIHEG AWYDPDKGGD
LNALCKYGNP NVLTLDIGTS QLAQATSAHT TLVEIEKYTG PMDNVTAFNG PVEMVAQCEY
VPASQGNPHD
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