Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4183 |
Symbol | |
ID | 6872767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4027863 |
End bp | 4028648 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642787116 |
Product | deoxyribose operon repressor |
Protein accession | YP_002217742 |
Protein GI | 198242768 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGACCA AGCAAAAAGA ACGTATCCGA CGCTTGATGG AGTTACTGAA AAAGACCGAT CGAATCCATC TGAAAGACGC CGCGCGGATG CTGGAAGTTT CGGTGATGAC CATTCGCCGC GATCTCAGCC AGGATGATGA CCCTTTACCG CTGACGCTGC TCGGCGGCTA TATCGTCATG GTAAATAAGC CTGCGTCTTC AACCAATATG CCGCTGCCGG CGAAAAAGAC GCATCATCGG GACGACCTTC CCGTTGCGAT CCTGGCCGCC GGCCTGGTGC GTGAAAACGA TCTGGTTTTT TTTGATAACG GTCCGGAAAT GCCATTAGTT ATCAGCATGA TACCGGATGA TATTACCTTT ACCGGGATTT GCTACTCGCA TCGGGTATTT ATCGCGCTGA ATGAAAAGCC TAATGCCACG GCGATTCTGT GCGGCGGCAC CTATCGGGCC AAGAGCGATG CCTTTTATGA TGCCAATAAT CCTTCGGCGC TGGATTCGCT CAATCCGCGC AAAGTGTTTA TTTCCGCCAG CGGCGTACAT GAACATTTTG GCGTGAGCTG GTTTAACCCG GATGATCTTG CCGCCAAACG TAAAGCGATG GAACGCGGTC TGCGCAAAAT TTTGCTGGCG CGTCACGCCC TGTTTGATGA GGTCGCGCCT GCCAGCATTG GTCCGCTTTC TGCCTTTGAT GTCCTGATTA GCGATCGCCC ATTACCGACA GATTATGCCG TTCACTGTCG GAATGGTTCC GTCAAAGTCA TCACGCCTGA TTCGGAAAGT GAATAA
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Protein sequence | METKQKERIR RLMELLKKTD RIHLKDAARM LEVSVMTIRR DLSQDDDPLP LTLLGGYIVM VNKPASSTNM PLPAKKTHHR DDLPVAILAA GLVRENDLVF FDNGPEMPLV ISMIPDDITF TGICYSHRVF IALNEKPNAT AILCGGTYRA KSDAFYDANN PSALDSLNPR KVFISASGVH EHFGVSWFNP DDLAAKRKAM ERGLRKILLA RHALFDEVAP ASIGPLSAFD VLISDRPLPT DYAVHCRNGS VKVITPDSES E
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