Gene SeD_A4180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4180 
Symbol 
ID6873058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4024246 
End bp4025259 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content56% 
IMG OID642787113 
ProductDeoX protein 
Protein accessionYP_002217739 
Protein GI198243046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAC GTATTACATT ATGGCGGGAG CTTTTTAACG AGCAGCCGCG TATCTTGCTG 
GAAAATGATG ATTTTACGGT TACGGCGTTT CGTTACGCCA GCGGCGTGGA AGGACTGAAA 
ATACAAAACA GCCGCGGTCA TCTGGTGATT CTGCCCTGGA TGGGGCAGAT GATTTGGGAC 
GCGCAGTTTG ACGGTCATGA TCTGACTATG CGCAACATGT TCCGTCAGCC GAAGCCGGCT 
GCGGAAGTGG TGGCAACGTA TGGTTGCTTT GCTTTCCATT CCGGACTATT GGCGAATGGC 
TGCCCGTCGC CGGAAGATAC ACATCCGCTG CACGGCGAGA TGCCCTGCGC TGCCATGGAC 
GACGCCTGGC TGGAGTTAGA GGGCGACAGT CTGCGCGTGA CCGGGCGCTA CGAGTATGTG 
ATGGGGTTCG GTCATCATTA TCAGGCGCAA CCTGCGGTGG TAATGCGTAA AGCAAGCGCG 
CTGTTTGATA TTCAGATGAC AGTGACTAAC CAGGCTTCAG TCGCCATGCC GCTACAGTAC 
ATGTGCCACA TGAACTATGC CTATGTGCCG AACGCCACGT TCCGTCAGAA TATCCCGGAT 
ACCGCGCTGA AGCTACGCGA GTCGGTGCCG GCGCATGTCA AACCCACGGC GCAGTGGCTG 
GCGTTTAATC AACGACTTTT GCAGGGTGAA GCCTCGCTGG CAACGCTCAA CGCGCCTGGC 
TTTTACGACC CGGAAATCGT ATTCTTCGCC GATGAACTGG ACAAGTACAC GGATACCCCG 
GAATTCAGTA TGATCGCCCC GGATGGCACC ACGTTCGTGA CACGTTTCGC CAGCGCGGAG 
CTAAATTACG TGACCCGCTG GATTCTTTAT AACGGCGATC AGCAGGTTGC CGCCTTTGCC 
CTGCCCGCGA CCTGTCGGCC TGAAGGTTTT CTCGCGGCGC AGCGAAATGG AACCTTGCTT 
CAACTGGAAC CGCAGCAAAC CCGGACGTTC ACCGTCACGA CAGGCATTGT CTGA
 
Protein sequence
MTTRITLWRE LFNEQPRILL ENDDFTVTAF RYASGVEGLK IQNSRGHLVI LPWMGQMIWD 
AQFDGHDLTM RNMFRQPKPA AEVVATYGCF AFHSGLLANG CPSPEDTHPL HGEMPCAAMD 
DAWLELEGDS LRVTGRYEYV MGFGHHYQAQ PAVVMRKASA LFDIQMTVTN QASVAMPLQY 
MCHMNYAYVP NATFRQNIPD TALKLRESVP AHVKPTAQWL AFNQRLLQGE ASLATLNAPG 
FYDPEIVFFA DELDKYTDTP EFSMIAPDGT TFVTRFASAE LNYVTRWILY NGDQQVAAFA 
LPATCRPEGF LAAQRNGTLL QLEPQQTRTF TVTTGIV