Gene SeD_A4174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4174 
Symbol 
ID6871949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4017806 
End bp4018129 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content48% 
IMG OID642787107 
ProductDNA-binding protein 
Protein accessionYP_002217733 
Protein GI198245636 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAA AAACTAAATT CAAAAGCCCT GCCTTTGAAG CGATTCATAG CGCGGCATCT 
GGATTATTTA GCGTGGATGC CATTCCCCAG GAGACAATGC GCAGTTTTGA CACGGCCTGC 
TTAAGCAGCA TCAAAGACCT GCAGCCACTT GAAATAAAAG CGTTACGAGA AGAACTCAAC 
GTTAGCCAGC CGGTTTTCGC TCGGTACCTG AATACCAGCG TATCAACGGT TCAAAAGTGG 
GAAAGCGGCG CCAAGCGTCC CAGCGGGATG TCACTGAAAC TACTTAATGT TGTCCAAAAA 
CACGGGCTAA AGGTGCTGGT ATGA
 
Protein sequence
MSAKTKFKSP AFEAIHSAAS GLFSVDAIPQ ETMRSFDTAC LSSIKDLQPL EIKALREELN 
VSQPVFARYL NTSVSTVQKW ESGAKRPSGM SLKLLNVVQK HGLKVLV