Gene SeD_A4159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4159 
Symbol 
ID6874148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4005449 
End bp4006390 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content50% 
IMG OID642787096 
Producthypothetical protein 
Protein accessionYP_002217722 
Protein GI198243285 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.241117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.413105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA GCCCCACGTC CACGCCTCAT GATGCGGTAT TCAAAACGTT TTTACGCCAT 
CCGGATACCG CGCGGGATTT TCTCAATATT CATCTTCCCC ATTCGCTAAG AATACGTTGC
GATCTGACGA CGTTGAAACT GGCGCCGGAC AGTTTTATCG AGAAAAATTT ACGCGCGTTT
TATTCCGATG TCCTTTGGTC ACTAAAAACG TGTGAAGGCG ACGGTTATAT CTATGTCGTT
ATAGAGCATC AGAGTACGCC GGACGCGCAT ATGGCGTTCC GGTTAATGCG TTACGCGACT
GCCGCGATGC AGCGCCATCT GGATGCTGGC CATAAAACGT TACCGCTGGT GATTCCCATG
CTGTTTTACC ATGGCGCGAA AAGCCCGTAT CCCTTTTCGC TGTGCTGGCT GGATGAGTTT
GACGATCCTG CACTGGCGCG TCAGCTTTAT GCGACGGCAT TTCCACTGGT AGACATTACG
GTGGTGCCGG ATAACGAGAT TATGCAGCAT CGACGTATCG CGATGCTGGA GCTGGTACAA
AAGCATATAC GTCAACGCGA CCTGATGGGA TTGGTCGAGC GCTTAGCGGT ACTTCTGATT
ACGGGAAACG CTAATGACAG TCAGCTAAAA GCGCTGTTTA ATTATTTGCT AATACAGCAT
GGCAGCACGC CTCGTTTTGG CAAGTTTATC CGCGAGGTGG CGCGTCGTGT TCCCCAACAC
AAGGAGAGAT TAATGACGAT CGTAGACAGA ATACGTGAAT CGGGGCGCAG AAAAGGTAAG
CGTGAAGGCG TGCAACAAGG CATACAGCAA GGTATACATC AAGGTAAGCA GGAGGAAGCC
TTGCGTATTG CGCATACGAT GCTGGAACAG GGGATCGAGC GAGAGATGGT GCTGATGATT
ACCGGGCTTT CTGACGAAGA GATTAAGGCA AAGCGCCATT AA
 
Protein sequence
MKKSPTSTPH DAVFKTFLRH PDTARDFLNI HLPHSLRIRC DLTTLKLAPD SFIEKNLRAF 
YSDVLWSLKT CEGDGYIYVV IEHQSTPDAH MAFRLMRYAT AAMQRHLDAG HKTLPLVIPM
LFYHGAKSPY PFSLCWLDEF DDPALARQLY ATAFPLVDIT VVPDNEIMQH RRIAMLELVQ
KHIRQRDLMG LVERLAVLLI TGNANDSQLK ALFNYLLIQH GSTPRFGKFI REVARRVPQH
KERLMTIVDR IRESGRRKGK REGVQQGIQQ GIHQGKQEEA LRIAHTMLEQ GIEREMVLMI
TGLSDEEIKA KRH