Gene SeD_A4153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4153 
Symbol 
ID6873304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3998712 
End bp3999392 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content52% 
IMG OID642787090 
Producthypothetical protein 
Protein accessionYP_002217716 
Protein GI198242173 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.870386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACAC CCGCGAATTT TAACGGTCAA CGCCCTGCCA TTGATGCTAA CGACGCAGTA 
ATGCTGCTGA TTGACCACCA AAGTGGCCTG TTTCAGACCG TCGGCGACAT GCCGATGCCG
GAATTACGCG CGCGCGCCGC GGCGCTGGCT AAAATCGCTA CCTTATGCAA TATGCCGGTC
ATTACTACCG CATCCGTACC ACAGGGACCA AATGGTCCGC TGATTCCGGA AATCCATGCG
AATGCCCCCC ACGCGCAATA TGTCGCGCGT AAAGGGGAAA TTAATGCCTG GGATAATGAC
GATTTTGTAC AAGCGGTAAA AGCGACAGGC CGTAAAACAC TGATCGTCGC CGGTACTATT
ACCAGTGTCT GCATGGCTTT TCCAGCCATC AGCGCCGTCG CGGAAGGGTA CAAGGTATTT
GCGGTAATTG ATGCCTCCGG CACGTACAGT AAAATGGCGC AGGAAATTAC GATGGCCCGC
GTGGTGCAGG CGGGCGTAGT ACCAATGGAT ACCGCGGCGG TAGCCTCTGA GATGCAACGT
ACCTGGAATA GGGAAGATGC CGCAGAATGG GCGGATGTAT ATACCAAAAT ATTCCCGGCC
TATCAGCTAC TGATTGAAAG TTATACCAAA GCGCAGGAAG TAGTAAAAAA TAATGAACTA
CTGGATTCTC AACGCGCATA A
 
Protein sequence
MSTPANFNGQ RPAIDANDAV MLLIDHQSGL FQTVGDMPMP ELRARAAALA KIATLCNMPV 
ITTASVPQGP NGPLIPEIHA NAPHAQYVAR KGEINAWDND DFVQAVKATG RKTLIVAGTI
TSVCMAFPAI SAVAEGYKVF AVIDASGTYS KMAQEITMAR VVQAGVVPMD TAAVASEMQR
TWNREDAAEW ADVYTKIFPA YQLLIESYTK AQEVVKNNEL LDSQRA