Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4153 |
Symbol | |
ID | 6873304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3998712 |
End bp | 3999392 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642787090 |
Product | hypothetical protein |
Protein accession | YP_002217716 |
Protein GI | 198242173 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.870386 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACAC CCGCGAATTT TAACGGTCAA CGCCCTGCCA TTGATGCTAA CGACGCAGTA ATGCTGCTGA TTGACCACCA AAGTGGCCTG TTTCAGACCG TCGGCGACAT GCCGATGCCG GAATTACGCG CGCGCGCCGC GGCGCTGGCT AAAATCGCTA CCTTATGCAA TATGCCGGTC ATTACTACCG CATCCGTACC ACAGGGACCA AATGGTCCGC TGATTCCGGA AATCCATGCG AATGCCCCCC ACGCGCAATA TGTCGCGCGT AAAGGGGAAA TTAATGCCTG GGATAATGAC GATTTTGTAC AAGCGGTAAA AGCGACAGGC CGTAAAACAC TGATCGTCGC CGGTACTATT ACCAGTGTCT GCATGGCTTT TCCAGCCATC AGCGCCGTCG CGGAAGGGTA CAAGGTATTT GCGGTAATTG ATGCCTCCGG CACGTACAGT AAAATGGCGC AGGAAATTAC GATGGCCCGC GTGGTGCAGG CGGGCGTAGT ACCAATGGAT ACCGCGGCGG TAGCCTCTGA GATGCAACGT ACCTGGAATA GGGAAGATGC CGCAGAATGG GCGGATGTAT ATACCAAAAT ATTCCCGGCC TATCAGCTAC TGATTGAAAG TTATACCAAA GCGCAGGAAG TAGTAAAAAA TAATGAACTA CTGGATTCTC AACGCGCATA A
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Protein sequence | MSTPANFNGQ RPAIDANDAV MLLIDHQSGL FQTVGDMPMP ELRARAAALA KIATLCNMPV ITTASVPQGP NGPLIPEIHA NAPHAQYVAR KGEINAWDND DFVQAVKATG RKTLIVAGTI TSVCMAFPAI SAVAEGYKVF AVIDASGTYS KMAQEITMAR VVQAGVVPMD TAAVASEMQR TWNREDAAEW ADVYTKIFPA YQLLIESYTK AQEVVKNNEL LDSQRA
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