Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4135 |
Symbol | |
ID | 6871211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3983456 |
End bp | 3985774 |
Gene Length | 2319 bp |
Protein Length | 772 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642787081 |
Product | alpha-xylosidase YicI |
Protein accession | YP_002217708 |
Protein GI | 198246042 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTA GCGACGGAAA CTGGCTGATC CAGCCTGGCC TTAATTTGAT TCACCCGGTT CAGGTGTTCG ACGTTGAACA GCACGGGAAT GAGATGGTGA TCTATGCCGC GCCGCGTGAT GTCCGCGAAC GAACCTGGCA ACTGGATACC CCGTTGTTTA CCCTGCGCTT TTTCTCGCCG CAGGAAGGAG TGATAGGTGT ACGGATGGAA CACTTCCAGG GCGCTTTGGA TAACGGCCCA CATTATCCGC TCAATGTCTT GCAAGATATC AACGTGGAGA TGCAGAACAA CGCCGAATTT GCCGAACTCA AGAGCGGCAG CCTGAGCGTG CGCGTCACCA AAGGCGAGAT CTGGTCTCTG GATTTTCTGC GCAACGGTGT ACGTATCACC GGTAGCCAGT TGAAGAATAA CGGCTATGTG CAGGATACCA ACAGCGGGCG CAACTACATG TTCGAGCGTC TGGATCTCGG CGTGGGCGAA ACCGTCTACG GGCTGGGCGA GCGCTTTACC GCGCTGGTGC GTAACGGTCA GACGGTGGAG ACCTGGAACC GCGACGGCGG CACCAGCACC GAGCAATCGT ACAAGAATAT CCCGTTCTAT ATCACCAACC GTGGCTACGG TGTGCTGGTG AATCATCCGC AGTGCGTGTC GTTTGAAATT GGCTCCGAGA AAGTCTCCAA AGTTCAGTTC AGCGTCGAGA GCGAGTATCT GGAATACTTC GTCATCGACG GCCCGACCCC GAAAGACGTG CTGAACCGCT ATACCCAATT TACGGGTCGT CCGGCGCTGC CGCCCGCCTG GTCGTTTGGC CTGTGGCTGA CCACCTCATT CACCACCAAC TACGACGAAG CGACCGTTAA CAGTTTTATC GACGGTATGG CCGAGCGCAA TCTGCCGCTG CACGTCTTCC ACTTCGACTG TTTCTGGATG AAAGCTTTTC AGTGGTGCGA TTTTGAATGG GACCCGGTGA CTTTCCCCGA TCCGAAAGGG ATGATTCGCC GCCTGAAAGC GAAAGGGCTG AAAGTCTGCG TGTGGATTAA CCCCTACATC GGCCAGAAAT CCCCGGTCTT CCAGGAGTTG AAAGAGAAAG GATATTTGCT AAAACGCCCG GACGGCTCCT TGTGGCAGTG GGATAAATGG CAGCCGGGAC TGGCGATTTA CGACTTCACC AACCCGCAAG CCTGCGAATG GTATGCCGAC AAGCTGAAGG GCCTGGTGGA GATGGGAGTG GACTGCTTCA AAACTGACTT CGGCGAACGC ATTCCAACGG ATGTGCAGTG GTTTGATGGT TCAGATCCAC AGAAAATGCA CAACCATTAT GCCTACATCT ACAACGAATT GGTGTGGAAC GTGCTGAAAG AGACCGTCGG CGTTGAAGAG GCGGTGCTGT TCGCCCGTTC CGCCTCGGTG GGCGCGCAAC AGTTCCCGGT GCACAGGGGC GGCGACTGCT ACGCCAACTA CGAATCGATG GCGGAAAGCC TGCGCGGCGG GCTGTCCATC GGCCTGTCAG GGTTTGGCTT CTGGAGTCAT GATATTGGCG GATTCGAGAA TACCGCGCCG GCGCATGTCT ACAAGCGGTG GTGCGCATTC GGCTTGCTCT CCAGCCACAG CCGCCTGCAC GGTAGCAAAT CCTACCGGGT TCCGTGGGCC TATGACGACG AGTCCTGTGA CGTGGTGCGC TTCTTCACTG AACAGAAGTG CCGGATGATG CCGTATCTGT ATCGGGAAGC GGCGCGTGCC AACGAAGCCG GTACGCCAAT GATGCGGGCG ATGATGCTGG AGTTCCCGGA CGATCCGGCG TGTGATTATC TTGATCGCCA GTACATGCTG GGAGATGCGG TCATGGTAGC GCCGGTATTT AGTGAAGCGG GCGACGTGGA GTTCTACCTG CCAGAAGGCC GCTGGACGCA CCTGTGGCGC AACGATGAAG TGCAGGGCAG TCGCTGGCAT AAACAGCAGC ATGACTTCCT GAGCCTGCCA GTGTATGTGC GTGACAATAC ACTACTGGCG CTGGGCAACA ATAGCCAGAA GCCCGATTAC GCCTGGCATG AGGGTACGGC CTTCCAGTTA TTCCATCTGG ATGACGGCTG CGAAGCGGTC TGCGAAGTCC CTGCTACGGA TGGTTCGACA ATCTTTACGC TGCAGGCGAA ACGCACAGGC AATACCATTA CGGTGAGCGG CGAAGGCGAG GCGCGCAACT GGACGCTGTG TCTGCGTAAT ATTACGCAGA TTAGCGGTAC CAAATGCGGC TCATATGCGG GAAGTGAACT GGGCGTAGTG GTTACCCCGC TGGGAAATGA AGTGGTGATT ACGCTTTAA
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Protein sequence | MKISDGNWLI QPGLNLIHPV QVFDVEQHGN EMVIYAAPRD VRERTWQLDT PLFTLRFFSP QEGVIGVRME HFQGALDNGP HYPLNVLQDI NVEMQNNAEF AELKSGSLSV RVTKGEIWSL DFLRNGVRIT GSQLKNNGYV QDTNSGRNYM FERLDLGVGE TVYGLGERFT ALVRNGQTVE TWNRDGGTST EQSYKNIPFY ITNRGYGVLV NHPQCVSFEI GSEKVSKVQF SVESEYLEYF VIDGPTPKDV LNRYTQFTGR PALPPAWSFG LWLTTSFTTN YDEATVNSFI DGMAERNLPL HVFHFDCFWM KAFQWCDFEW DPVTFPDPKG MIRRLKAKGL KVCVWINPYI GQKSPVFQEL KEKGYLLKRP DGSLWQWDKW QPGLAIYDFT NPQACEWYAD KLKGLVEMGV DCFKTDFGER IPTDVQWFDG SDPQKMHNHY AYIYNELVWN VLKETVGVEE AVLFARSASV GAQQFPVHRG GDCYANYESM AESLRGGLSI GLSGFGFWSH DIGGFENTAP AHVYKRWCAF GLLSSHSRLH GSKSYRVPWA YDDESCDVVR FFTEQKCRMM PYLYREAARA NEAGTPMMRA MMLEFPDDPA CDYLDRQYML GDAVMVAPVF SEAGDVEFYL PEGRWTHLWR NDEVQGSRWH KQQHDFLSLP VYVRDNTLLA LGNNSQKPDY AWHEGTAFQL FHLDDGCEAV CEVPATDGST IFTLQAKRTG NTITVSGEGE ARNWTLCLRN ITQISGTKCG SYAGSELGVV VTPLGNEVVI TL
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