Gene SeD_A4124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4124 
Symbol 
ID6874643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3969111 
End bp3969992 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content52% 
IMG OID642787070 
Productbeta-lactamase 
Protein accessionYP_002217697 
Protein GI198243289 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCT ATGCATTATT CTTTGTATGT ATATTTTCAA CATCAGCACT TCCTGCCATG 
GCGGCATTAG ATCCTTCACA ACCGTTATCA CCCGCGCCTC CGTTATCACT GTTTAAAGCG 
TGGGCTAAGC CTATAAAGCC GTTTCAAATC ACAGAAGGCG TGTGGTATGT CGGCACGAAA 
AATCTCTCTT CTATTCTGCT GACCACTCCG GCAGGGCATA TTCTTATTGA TGCGGGGTTG 
GATGAAAGCG CACCGCAAAT TAAAGCGAAT ATTGAAGCGG CAGGATTCCG CCTCACAGAC 
GTGCGCTATC TGTTGAACAG CCATGCGCGG CTGGATCAAG CGGGGGGCAT GGCACGTTTG 
AAAGCGTGGA GCGGCGCACA ATTGGTCGCC AGCCAACCCA ACGCCGATCA GATGGCGAGG 
GGTGGACGAG AGGATTTTGC GCTTGGCGAT GCGCTCCCCT TTCCGCCCGT CACCACCGAT 
AAAATTATCC ACAACCAGGA AAGCATCAGC CTCGGAGGGA TAACCGTGAC AGCACTATTC 
ACGCCTGGAC ATCTGCCCGG CTCAACTTCC TGGCGCGTAA CGCTCCGCAA CGGCAAGACG 
CTAATTTACG CAGATAGTCT CGCCACGCCC GACTATCTGC TGATTAACAA CAAAAATTAC 
CCTGACCTGG TTACTGATAT TCAGAGCAGC TTTAAGACAC TGGCCGCCCA GCATGTTGAT 
ATCTTTATTG CCAACAAAGG TGACCGCTTC GGGCTACTGG AGAAACGACA GCAACTTCGC 
AACGGCGATA CACAGGCATT CTTTGATTCC AATGGCTTGC AACAGTATGT GGAACGCTCG 
CGCCAGCGCT TCATCACACA ACTTACCGCA CAGCAGCCAT AA
 
Protein sequence
MNRYALFFVC IFSTSALPAM AALDPSQPLS PAPPLSLFKA WAKPIKPFQI TEGVWYVGTK 
NLSSILLTTP AGHILIDAGL DESAPQIKAN IEAAGFRLTD VRYLLNSHAR LDQAGGMARL 
KAWSGAQLVA SQPNADQMAR GGREDFALGD ALPFPPVTTD KIIHNQESIS LGGITVTALF 
TPGHLPGSTS WRVTLRNGKT LIYADSLATP DYLLINNKNY PDLVTDIQSS FKTLAAQHVD 
IFIANKGDRF GLLEKRQQLR NGDTQAFFDS NGLQQYVERS RQRFITQLTA QQP