Gene SeD_A4106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4106 
Symbol 
ID6875043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3954235 
End bp3955314 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content39% 
IMG OID642787053 
ProductUDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase 
Protein accessionYP_002217680 
Protein GI198241819 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.248516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG CATTTATTGG CGAAGCGGTA TCTGGTTTTG GAGGGATGGA AACCGTTATT 
AGCAACGTTA TCCATACGTT TGAAAATAGC TCTCCGAAAA TCAACTGTGA AATGTTTTTC
TTTTGTCGTA ATGACAAAAT GGATAAAGCA TGGCTAAAAG AGATTAAATA TGCGCAATCA
TTCTCAAATA TAAAATTAAG TTTTCTTCGT CGAGCTAAGC ATGTTTATAA TTTTAGTCAG
TGGCTGAAAG AAACGTCACC GGATATTGTG ATATGTATTG ATATCATCTC ATGTCTTTAT
GCCAATAAAG CACGAAAGAA AAGTGGTAAA CAGTTTACTA TTTTCTCGTG GCCGCATTTT
TCGCTCGACC ATAAAAAACA TGCAGAATGT ATAACGTACG CGGATTATCA TCTGGCCATA
AGTAGTGGTA TTAAAGAACA GATGATGGCA CGGGGTATCT CAGCGCAAAA TATTAGCGTC
GTTTATAATC CTGTCTCTAT TAAAACAATC ATTGTGCCGC CGCCTGAGCG CGATAAACCC
GCTGTATTTC TCTATGTAGG GCGTCTTAAA TTTGAAGGAC AGAAAAGAGT TAAAGATTTA
TTTGATGGCT TAACTCGTAC GACAGGGGAA TGGCAGCTAC ATATTATTGG TGATGGCTCA
GATTTTGAAA AGTGCCAGGC CTATAGTCGG GAGCTTGGTA TTGAGCAGCG TGTGATCTGG
TATGGTTGGC AAAGCGCGCC GTGGCAAGTC GTACAGCAAA AAATAAAAAA TGTCACCGCG
TTACTACTTA CCTCTGCGTT TGAGGGATTT CCTATGACCC TGCTGGAAGC AATGTCATAT
GGAATTCCGT GTATTAGTTC TGATTGTATG TCTGGCCCGC GCGATATGAT TAAACCCGGT
TTGAATGGTG AGCTTTACAC TCCGGGTGCT ATAGATGATT TTGTAGGACA CCTTAATCGC
GTTATTTCTG GTGAAGTAAA ATATCAGCAT GATATTATTC CCGGCACGAT TGAGAGATTT
TACGATGTGC TATATTTTAA AAATTTTAAT AATGCAATAT TCTCGAAATT ACAAAAGTGA
 
Protein sequence
MKIAFIGEAV SGFGGMETVI SNVIHTFENS SPKINCEMFF FCRNDKMDKA WLKEIKYAQS 
FSNIKLSFLR RAKHVYNFSQ WLKETSPDIV ICIDIISCLY ANKARKKSGK QFTIFSWPHF
SLDHKKHAEC ITYADYHLAI SSGIKEQMMA RGISAQNISV VYNPVSIKTI IVPPPERDKP
AVFLYVGRLK FEGQKRVKDL FDGLTRTTGE WQLHIIGDGS DFEKCQAYSR ELGIEQRVIW
YGWQSAPWQV VQQKIKNVTA LLLTSAFEGF PMTLLEAMSY GIPCISSDCM SGPRDMIKPG
LNGELYTPGA IDDFVGHLNR VISGEVKYQH DIIPGTIERF YDVLYFKNFN NAIFSKLQK