Gene SeD_A4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4100 
Symbol 
ID6875069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3949261 
End bp3950406 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content41% 
IMG OID642787049 
Productlipopolysaccharide 1,2-N-acetylglucosaminetransferase 
Protein accessionYP_002217676 
Protein GI198244660 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.564193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAA AAATCATATT TACTGTTACT CCTATATTTT CAATTCCTCC ACGTGGCGCG 
GCTGCGGTAG AAACCTGGAT TTACCAGGTT GCAAAACGAC TATCAATACC GAATGCTATT
GCTTGTATAA AGAATGCTGG CTATCCTGAA TATAATAAAA TAAACGATAA CTGTGATATT
CATTACATCG GGTTTAGTAA AGTTTATAAG CGTCTTTTTC AGAAATGGAC TCGTCTCGAC
CCACTACCCT ATTCCCAGCG CGTCCTTAAT ATTAGAGATA AAGTGACTAC CCAGGAAGAT
AGCGTCATTG TTATTCATAA TAGTATGAAA CTGTATCGGC AGATCAGAGA GCGCAATCCG
AATGCAAAAC TGGTTATGCA CATGCATAAC GCATTTGAAC CAGAACTTCC TGATAAGGAT
GCAAAAATTA TCGTGCCCAG TCAGTTTCTT AAAGCGTTTT ATGAAGAAAG ATTGCCCGCC
GCTGCTGTTA GTATTGTGCC TAATGGTTTT TGTGCTGAGA CTTATAAAAG AAACCCACAA
AATAACCTCC GTCAGCAATT AAATATTGCG GAAGATGCCA CCGTTCTCTT ATATGCCGGG
AGAATTTCGC CTGATAAAGG CATCCTGTTG CTTTTGCAGG CGTTCAAAAA ATTACGTACC
TTAAGAAGTA ATATTAAACT TGTCGTTGTT GGCGATCCTT ATGCAAGCCG CAAGGGTGAA
AAAGCAGAGT ATCAAAAGAA AGTACTGGAC GCCGCAAAAG AGATTGGAAC TGATTGTATT
ATGGCTGGGG GGCAATCTCC TGACCAGATG CATAACTTCT ATCATATAGC CGATCTGGTT
ATTGTGCCAT CTCAGGTTGA AGAAGCATTT TGCATGGTGG CTGTAGAAGC GATGGCAGCA
GGAAAAGCGG TTCTTGCCAG CAAAAAAGGG GGGATTAGCG AATTTGTGTT AGATGGCATA
ACGGGCTATC ACCTCGCAGA ACCTATGTCG AGCGACAGTA TAATTAATGA TATTAACCGT
GCGCTTGCTG ATAAGGAACG CCACCAGATT GCCGAAAAAG CAAAATCCCT GGTGTTTTCA
AAATACAGTT GGGAAAATGT AGCTCAGCGT TTCGAGGAAC AGATGAAAAG CTGGTTTGAT
AAGTGA
 
Protein sequence
MIKKIIFTVT PIFSIPPRGA AAVETWIYQV AKRLSIPNAI ACIKNAGYPE YNKINDNCDI 
HYIGFSKVYK RLFQKWTRLD PLPYSQRVLN IRDKVTTQED SVIVIHNSMK LYRQIRERNP
NAKLVMHMHN AFEPELPDKD AKIIVPSQFL KAFYEERLPA AAVSIVPNGF CAETYKRNPQ
NNLRQQLNIA EDATVLLYAG RISPDKGILL LLQAFKKLRT LRSNIKLVVV GDPYASRKGE
KAEYQKKVLD AAKEIGTDCI MAGGQSPDQM HNFYHIADLV IVPSQVEEAF CMVAVEAMAA
GKAVLASKKG GISEFVLDGI TGYHLAEPMS SDSIINDINR ALADKERHQI AEKAKSLVFS
KYSWENVAQR FEEQMKSWFD K