Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4084 |
Symbol | |
ID | 6873713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3932624 |
End bp | 3933934 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642787033 |
Product | probable glucarate transporter |
Protein accession | YP_002217660 |
Protein GI | 198246157 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.463281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAA TAATAAAGCG CACAAAAGTG CGTCATACCA TTCTTATATT TTTATTTCTT GCTACCGTAT TTAATTATGC GGATCGCGCA ACTCTATCCG TAGTTGCCCC AATAATGAAT AAAGAATTAG GTTTTGATCC GGAAGCGATG GGCCTGGCCT TCTCCTCATT TGGTATTGCC TATGTCATTA TGCAACTACC CGGCGGTTGG CTATTAGACC GCTACGGTTC ACGACTGGTT TACGGTTGCG CATTGATTGG CTGGTCGTTA GTAACCATGT TTCAGGGAAC GATCTATCTG TATGGCAGCC CATTAATTGT ACTGGTTATT CTACGTCTGC TGATGGGCGC GATTGAAGCG CCTGCCTTTC CGGCGAACAG TCGTTTAAGC GTACAATGGT TTCCCAATAA TGAACGAGGT TTCGTTACTT CAGTTTATCA GGCTGCGCAA TATATCTCGC TGGGCATTAT CACCCCGCTA ATGACGATCA TTCTGCATAA TTTAAGCTGG CATTTTGTCT TCTATTATAT TGGCGCTATT GGCGTGATGC TCGGTATATT CTGGTTAATG AAAGTCAAAG ATCCGATGCA CCATCCAAAA GTTAATCAAG CGGAAATTGA CTATATTCGT AGCGGTGGTG GCGAGCCCTC TCTGGGCTGT AAAAAGGAGC CGCAGAAAAT AACGTTCGCG CAGATTAAAA CCGTCTGTGT TAACCGGATG ATGATCGGTG TTTATATCGG GCAATTCTGC GTCACCTCTA TCACCTGGTT CTTCCTGACC TGGTTCCCGA CCTATCTGTA CCAGGCGAAA GGCATGTCGA TTCTGAAAGT CGGTTTTGTG GCCAGTATTC CAGCCATTGC CGGTTTTATT GGCGGCCTGC TCGGCGGCGT GTTCTCCGAC TGGCTACTCA AACGCGGCTA TAGCCTTACC GTCGCGCGGA AACTGCCTGT TATCTGCGGT ATGTTGCTCT CTTGCGTAAT TGTGATCGCC AACTACACCT CTTCAGAATT TGTGGTCATT GCGGCGATGA GTCTGGCCTT TTTTGCCAAA GGGTTTGGTA ACCTGGGCTG GTGCGTACTC AGCGACACCT CGCCGAAGGA AGTTCTGGGT ATTGCCGGCG GCGTATTTAA CATGTGCGGC AATATGGCAA GCATCGTTAC GCCGCTGGTC ATCGGCGTGA TTCTTGCCAA TACTCAGTCG TTCGACTTTG CCATTTTATA CGTTGGCTCG ATGGGACTTA TTGGTCTCAT TTCATATCTG TTTATCGTCG GCCCGCTGGA TCGCATTACG CTGACATCAT CCGCAGCCTG A
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Protein sequence | MNTIIKRTKV RHTILIFLFL ATVFNYADRA TLSVVAPIMN KELGFDPEAM GLAFSSFGIA YVIMQLPGGW LLDRYGSRLV YGCALIGWSL VTMFQGTIYL YGSPLIVLVI LRLLMGAIEA PAFPANSRLS VQWFPNNERG FVTSVYQAAQ YISLGIITPL MTIILHNLSW HFVFYYIGAI GVMLGIFWLM KVKDPMHHPK VNQAEIDYIR SGGGEPSLGC KKEPQKITFA QIKTVCVNRM MIGVYIGQFC VTSITWFFLT WFPTYLYQAK GMSILKVGFV ASIPAIAGFI GGLLGGVFSD WLLKRGYSLT VARKLPVICG MLLSCVIVIA NYTSSEFVVI AAMSLAFFAK GFGNLGWCVL SDTSPKEVLG IAGGVFNMCG NMASIVTPLV IGVILANTQS FDFAILYVGS MGLIGLISYL FIVGPLDRIT LTSSAA
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