| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4077 |
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| Symbol | |
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| ID | 6872754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 3921484 |
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| End bp | 3925512 |
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| Gene Length | 4029 bp |
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| Protein Length | 1342 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642787026 |
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| Product | putative autotransporter |
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| Protein accession | YP_002217653 |
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| Protein GI | 198242645 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures |
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| COG ID | [COG5295] Autotransporter adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGAA TATTTAAAGT CCTCTGGAAT GCCGCTACGG GAACATTTGT TGTCACCAGC
GAAACCGCAA AAAGCCGCGG CAAAAAAAAC GGCCGCAGAA AGCTGGCAGT TTCCGCACTC
ATCGGTCTTA GCAGCATTAT GGTTTCTGCG GATGCACTGG CCAACGCAGG AAACGATACA
GGCGACGGCG TTACTCCAAC GGGTACCCAG ACTGGAGGAA AAGGGTGGAT TGCAATTGGT
ACCGATGCCA CAGCCAATAC TTACACCAAC GTTGATGGCG CAAGCGCCGC AATGGGTTAT
AAAGCCTCCG CGATGGGGAA ATGGAGTACC GCCATTGGTT CCTACAGCCA GTCCACCGGC
GACTCTTCGT TAGCGCTTGG CGTAAAATCG GTTTCAGCCG GTGACCGGGC CATTGCAATG
GGCGCCTCAT CCTCAGCCAG TGGAAGTTAT TCAATGGCAA TGGGCGTGTA TGCCAATTCG
AGCGGCGCAA AATCGGTTGC GTTAGGTTAT AAATCTGTCG CGAGCGGAGC AACTTCCTCT
GCATTAGGTT ATCAAGCTAC TGCGAGCGGC GACGACAGCG CTGCATTTGG TAATGGCGCA
AAAGCGATAG GCACCAACTC AGTTGCCCTT GGCTCGGGCT CTGTCGCCCA GGAAGACAAT
TCCGTCGCCG TGGGTAACAG CACCACTCAG CGGCAGATCA CCTACGTTGC TAAAGGCGAC
ATCAATTCCA CCAGTACCGA TGCCGTTACA GGTGCGCAAA TTTATTCTTT AAGTCAATCC
GTCGCCGACC GACTCGGCGG AGGGGCTTCC GTTAATAGTG ATGGTACAGT GAATGCCCCC
CTCTACGAGG TAGGCACAGG CATCTACAAT AACGTAGGCA GTGCATTAAG CGCACTTAAC
ACTTCTATCA CTAACACAGA GGCCTCTGTC GCAGGATTAG CCGAAGACGC GCTGTTGTGG
GATGAAAGCA TCAGCGCCTT TAGCGCTAGC CACACGGGAA ACGCCAGCAA AATCACCAAT
CTGGCGGCGG GTACCCTGGC CGCTGACAGC ACCGACGCCG TTAACGGCTC CCAGTTGTTT
GATACAAATG AGAAAGTGGA TCAGAACACC GCTGATATCA CCACCAATAC CAACAGCATC
AATCAGAACA CCACTGATAT TGCCACCAAC ACCACCAATA TCAACAACCT GAGCGATTCC
ATCACCACGC TCACCGATGA TGCCCTGCTT TGGGATGCAG CCTCTGGCGC ATTCAGCGCT
AAGCACAACG GAAGCGACAG TAAAATCACC AACCTGGCGG CGGGTACCCT GGCTGCGGAC
AGCACCGATG CCGTTAACGG CTCTCAGCTG TTTGCCACCA ACGAAAATGT GTCTCAGAAC
ACCACGGATA TCGCTGCCAA TACAACCAGC ATCAATCAGA ACACCACTGA TATCGCCACC
AACACCACCA GCATCAACAA CCTGAGCAAT TCCGTCACCA CGCTCACCGA TGATGCCCTG
TTATGGGATG CAGCCTCTGG CACATTCAGC GCCAGCCGTA GCGGAAGCAC CAGCAAGATC
ACCAATCTGG CGGCGGGCAC CCTGGCCGCG GACAGTACAG ACGCGGTGAA CGGCTCACAA
TTGTATGAAA CCAACCAGAA GGTGGATCAA AACACCTCTG CTATCGCAGA TATTAATACG
TCCATCACCA ATCTTAGCTC TGACAACCTG AGCTGGAATG AAACAACGAG TTCGTTCTCT
GCCAGCCACG GAAGTAGCAC GACAAACAAA ATCACCAACG TTGCTGCCGG AGAGCTGTCT
GAAGAAAGTA CCGACGCGGT TAACGGATCG CAGCTGTTCG AAACCAATGA AAAAGTGGAT
CAGAACACGA CCGATATCGC CGCCAATACC ACTAACATCA CTCAGAACAG CAGCGCGATT
GAGAACCTGA ATACTTCTGT CTCCGACATT AATACATCCA TTACCGGCCT CACTGATAAC
GCTCTGTTAT GGGACGAAGA CATCGGCGCT TTCAGCGCAA ACCACGGTGG AAGCACCAGT
AAAATAACCA ATGTCGCCGC CGGGGCGCTT TCTGAGGACA GTACGGACGC GGTAAACGGC
TCACAGTTGT ATGAAACTAA CCAGAAGGTG GATCAAAACA CCTCTGCTAT CGCGGATATC
AATACGTCCA TCACCAATCT TGGTACCGAT GCACTGAGCT GGGATGACGA AGAAGGCGCG
TTCAGCGCCA GCCACGGTAC CAGCGGTACC AATAAGATAA CCAATGTAGC AGCAGGTGAA
ATCGCCAGTG ACAGTACTGA CGCTGTTAAT GGCTCTCAGC TCTATGAAAC TAACATGCTG
ATTTCTCAGT ATAGTGAATC TATTAGCCAA CTAGCCGGCG ATACCAGCGA AACCTATATC
ACGGAAAATG GTACCGGCGT GAAATACATC CGTACGAATG ATAATGGGCT TGAAGGCCAG
GATGCATACG CAACGGGTAA CGGCGCAACG GCAGTAGGTT ACGACGCCGT CGCCTCTGGC
GCTGGCAGTC TGGCTCTTGG CCAAAACAGC AGCAGCAGCA TTGAGGGCAG TATCGCTTTG
GGCAGTGGCT CCACCTCTAA CCGCGCTATT ACAACCGGTA TACGAGAAAC GAGCGTAACA
AGCGATGGCG TCGTCATTGG CTACAATACA ACAGACAGAA AGTTGCTGGG CGCGTTGTCA
TTGGGGACGG ATGGAGAAAG CTATCGTCAA ATTACCAACG TTGCTGACGG CTCTGAAGCG
CAAGATGCGG TAACAGTTCG TCAGTTACAA AATGCCATTG GTGCGGTCAC TACTACACCG
ACCAAGTACT ACCACGCAAA CTCAACGGAA GAAGATTCAC TGGCTGTCGG AACTGACTCA
CTGGCAATGG GTGCGAAGAC CATCGTCAAT GCTGATGCAG GTATTGGTAT TGGTCTGAAT
ACACTGGTGA TGGCTGATGC CATCAACGGT ATTGCTATCG GTTCTAACGC ACGCGCCAAT
CATGCAAACA GTATTGCAAT GGGTAATGGT TCTCAGACCA CTCGCGGCGC ACAGACTGAC
TACACCGCCT ACAACATGGA CACACCGCAG AACTCTGTCG GTGAGTTCTC TGTCGGCAGT
GAAGACGGTC AACGTCAGAT CACTAACGTC GCGGCGGGTT CGGCAGATAC CGATGCCGTT
AACGTGAGTC AATTGAAAGT AACGGACGCG CAGGTTTCCA GGAATACCCA GAGCATTACT
AACCTGAATA CTCAGGTATC GAATCTGGAT ACCCGCGTCA CCAATATCGA AAACGGCATT
GGCGATATCG TCACTACCGG TAGCACCAAG TACTTCAAGA CCAACACCGA TGGCGCAGAT
GCAAATGCCC AGGGTGCGGA CAGCGTCGCG ATTGGCTCTG GCTCTATTGC TGCCGCTGAA
AACAGCGTGG CGTTAGGCAC AAATTCCGTC GCAGATGAAG CTAATACTGT GTCTGTCGGC
TCTTCTACTC AACAACGCCG TATTACCAAC GTTGCCGCAG GGGTGAACAA CACTGACGCG
GTTAATGTGG CGCAACTGAA AGCCTCAGAA GCAGGCTCCG TGCGTTATGA AACCAATGCA
GATGGCTCGG TTAACTATAG CGTGCTCAAC CTGGGAGACG GGAGTGGCGG CACCACTCGG
ATCGGCAATG TTTCTGCGAC GGTGAATGAT ACGGATGCGG TGAACTATGC GCAATTGAAA
CGCAGCGTCG AAGAAGCAAA CACCTATACC GACCAAAAAA TGGGTGAAAT GAACAGCAAA
ATCAAAGGCG TAGAAAACAA GATGAGCGGC GGTATCGCCT CAGCGATGGC GATGGCCGGT
CTGCCACAAG CCTACGCCCC GGGCGCCAAC ATGACCTCGA TTGCTGGCGG TACGTTTAAT
GGTGAAAGTG CCGTCGCCAT TGGTGTCTCC ATGGTAAGTG AAAGCGGGGG CTGGGTGTAT
AAATTGCAAG GAACCAGCAA CAGCCAGGGC GATTACTCTG CGGCCATTGG CGCGGGCTTC
CAGTGGTAA
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| Protein sequence | MNRIFKVLWN AATGTFVVTS ETAKSRGKKN GRRKLAVSAL IGLSSIMVSA DALANAGNDT
GDGVTPTGTQ TGGKGWIAIG TDATANTYTN VDGASAAMGY KASAMGKWST AIGSYSQSTG
DSSLALGVKS VSAGDRAIAM GASSSASGSY SMAMGVYANS SGAKSVALGY KSVASGATSS
ALGYQATASG DDSAAFGNGA KAIGTNSVAL GSGSVAQEDN SVAVGNSTTQ RQITYVAKGD
INSTSTDAVT GAQIYSLSQS VADRLGGGAS VNSDGTVNAP LYEVGTGIYN NVGSALSALN
TSITNTEASV AGLAEDALLW DESISAFSAS HTGNASKITN LAAGTLAADS TDAVNGSQLF
DTNEKVDQNT ADITTNTNSI NQNTTDIATN TTNINNLSDS ITTLTDDALL WDAASGAFSA
KHNGSDSKIT NLAAGTLAAD STDAVNGSQL FATNENVSQN TTDIAANTTS INQNTTDIAT
NTTSINNLSN SVTTLTDDAL LWDAASGTFS ASRSGSTSKI TNLAAGTLAA DSTDAVNGSQ
LYETNQKVDQ NTSAIADINT SITNLSSDNL SWNETTSSFS ASHGSSTTNK ITNVAAGELS
EESTDAVNGS QLFETNEKVD QNTTDIAANT TNITQNSSAI ENLNTSVSDI NTSITGLTDN
ALLWDEDIGA FSANHGGSTS KITNVAAGAL SEDSTDAVNG SQLYETNQKV DQNTSAIADI
NTSITNLGTD ALSWDDEEGA FSASHGTSGT NKITNVAAGE IASDSTDAVN GSQLYETNML
ISQYSESISQ LAGDTSETYI TENGTGVKYI RTNDNGLEGQ DAYATGNGAT AVGYDAVASG
AGSLALGQNS SSSIEGSIAL GSGSTSNRAI TTGIRETSVT SDGVVIGYNT TDRKLLGALS
LGTDGESYRQ ITNVADGSEA QDAVTVRQLQ NAIGAVTTTP TKYYHANSTE EDSLAVGTDS
LAMGAKTIVN ADAGIGIGLN TLVMADAING IAIGSNARAN HANSIAMGNG SQTTRGAQTD
YTAYNMDTPQ NSVGEFSVGS EDGQRQITNV AAGSADTDAV NVSQLKVTDA QVSRNTQSIT
NLNTQVSNLD TRVTNIENGI GDIVTTGSTK YFKTNTDGAD ANAQGADSVA IGSGSIAAAE
NSVALGTNSV ADEANTVSVG SSTQQRRITN VAAGVNNTDA VNVAQLKASE AGSVRYETNA
DGSVNYSVLN LGDGSGGTTR IGNVSATVND TDAVNYAQLK RSVEEANTYT DQKMGEMNSK
IKGVENKMSG GIASAMAMAG LPQAYAPGAN MTSIAGGTFN GESAVAIGVS MVSESGGWVY
KLQGTSNSQG DYSAAIGAGF QW
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