Gene SeD_A4072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4072 
SymbolmtlR 
ID6872871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3918807 
End bp3919397 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content54% 
IMG OID642787021 
Productmannitol repressor protein 
Protein accessionYP_002217648 
Protein GI198243447 
COG category[K] Transcription 
COG ID[COG3722] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA ACCCGGCGCA GGTTAGCCTG CGCCCAAATA ACAGATTGTC AGATATGCAG 
GCAATAATGG AACAAACCCA GGCCTTTGAA AATCGTGTGC TTGAGCGTCT GAATGCTGGC 
AAAACCGTAC GGAGCTTCCT GATTACCGCC GTCGAGTTAT TGACCGAGGC GGTGAACATT 
CTGGTGCTCC AGGTGTTTCG CAAAGACGAC TATGCCGTGA AATACGCTGT GGAACCGTTG 
CTGGACGGCG ACGGGCCGCT GGGCGATCTT TCGGTACGTC TGAAACTTAT CTATGGCCTG 
GGCGTACTCA GCCGCACCGA ATATGAAGAT GCGGAGCTGT TAATGGCGCT GCGCGAAGAG 
CTGAATCACG ATGGCAATGA GTACGCCTTT ACCGACGATG AAATCCTCGG GCCGTTTGGC 
GAACTGCACT GCGTCATGGC GCTACCGCCG CCGCCGCATT TTGATACGTC CGACGCGGCG 
CTATACGCCA TGCAAATTCA GCGCTACCAG CAGGCGGTGC GTTCGACGAT GGTCCTCTCT 
CTGACCGAGC TGATTTCTAA AATCAGCTTA AAAAAGGCCT TTCAAAAGTA A
 
Protein sequence
MTQNPAQVSL RPNNRLSDMQ AIMEQTQAFE NRVLERLNAG KTVRSFLITA VELLTEAVNI 
LVLQVFRKDD YAVKYAVEPL LDGDGPLGDL SVRLKLIYGL GVLSRTEYED AELLMALREE 
LNHDGNEYAF TDDEILGPFG ELHCVMALPP PPHFDTSDAA LYAMQIQRYQ QAVRSTMVLS 
LTELISKISL KKAFQK