Gene SeD_A4063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4063 
Symbol 
ID6875539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3905069 
End bp3905884 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content54% 
IMG OID642787012 
Productputative transcriptional regulator 
Protein accessionYP_002217639 
Protein GI198241882 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.453209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAT TATCCATGAC ATTACCGATT AAAGTCCAAA ACGGCGGATT ATTTATTTCT 
CGCGGCATTG GGCGTCATCC TGCCAGGCGT CTGCAATCGT GGGAAATTAT ATTTGTGGAA
AAAGGCTGCC TGAAAATTCA GGAAGAAGAA TGTGTTTTCT GTGTCGAAGC CGGGGAAAGC
CTGTTGCTTT GGCCGCATCG CCGCCATATT GGCGTTGAGG AGTTTCCCGC CGATCTTAAA
TTTTACTGGC TCCATTTTGA GGTCAAAGCG CCGGACAGCA ACCCGCGCTG GCTGACGCAT
CTTTCCGTGC CGCAGCATAC CCAGGTTGCC GATCCGCAGG CGCTGATTGC GCTTTTTCGC
CAGTTTATGA ACGAGCAGGA AAAGCACCAG CGCAGCCCGG CGCTGGAGTT CATCGTGCTG
CTGATTTTGC AGCAGCTCAC CGTTGACGCC CGGCAGAATG AAAACGCCGA GGCCGCTGGC
GTGTCGCTGG CCTGGAAAGT ACAGCAGTTG ATTCGAACGC ACTATCACCT GCCGCTTTCC
AGCTCGGTTC TGGCGAAAGA ACTGCATTGC AATGTGGATT ATCTGGGACG CGTTTATCGG
CGGGTATTTC ACCTTACGCT AACGGAAGCC ATCCACCGCC AGCGGGTGCG CGAGGCGGAA
AAGTTGCTGA TTAGCGACGC GCGTTCGTTA AAAGAGGTGG CGGAACGGTG CGGTTTTAAT
GACGTTGGTT ACTTTCGCCA GATCTTCCGC AAGCACACCG GCCTGACGCC TACCGCCTGG
AAGCGGCGCT ACAGTAAGGA ACACGTTAAT TCTTGA
 
Protein sequence
MLELSMTLPI KVQNGGLFIS RGIGRHPARR LQSWEIIFVE KGCLKIQEEE CVFCVEAGES 
LLLWPHRRHI GVEEFPADLK FYWLHFEVKA PDSNPRWLTH LSVPQHTQVA DPQALIALFR
QFMNEQEKHQ RSPALEFIVL LILQQLTVDA RQNENAEAAG VSLAWKVQQL IRTHYHLPLS
SSVLAKELHC NVDYLGRVYR RVFHLTLTEA IHRQRVREAE KLLISDARSL KEVAERCGFN
DVGYFRQIFR KHTGLTPTAW KRRYSKEHVN S