| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4058 |
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| Symbol | |
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| ID | 6871579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 3900221 |
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| End bp | 3901207 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642787007 |
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| Product | trap dicarboxylate transporter DctP subunit |
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| Protein accession | YP_002217634 |
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| Protein GI | 198244332 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.677544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.748274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAC ACGTTATTGC TCGTTCATTA TTGATAGCTG GTCTGACGGT TTTCAGCGTG
TCGTCTCTGG CGGCGCAATC TTTACGTTTT GGTTATGAAA CACCGCAAAC TGACTCCCAA
CATATTGCCG CGAAAAAATT TAACGAATTA TTAAAAGAAA AAACTAACGG CGAATTAACG
CTAAAACTCT TTCCTGACAG CACATTAGGT AACGCCCAGG CAATGATCAG CGGGGTGCGC
GGCGGAACTA TTGATATGGA AATGTCCGGT TCGAACAATT TCACCGGCCT GGCCCCTGTA
TTCAACTTAC TTGATGTCCC CTTCCTGTTT CGCGATACCG CGCATGCGCA TAAAACGCTC
GACGGCAAAG TCGGCGATGA ACTGAAAAAA TCACTCGATT CAAAAGGGTT AAAAGTGCTG
GCCTACTGGG AAAACGGCTG GCGCGACGTC ACCAACTCCC GCGCGCCGGT AAAAACGCCG
GGCGATTTGA AAGGCTTAAA AATCCGCACT AACAACAGCC CAATGAATAT CGCGGCCTTT
AAAATCTTCG GCGCGAACCC TATTCCGATG CCGTTCTCCG AAGTCTATAC CGGCCTCGAA
ACCCGTACGA TTGATGCCCA AGAACACCCT ATCAACGTCG TGTGGTCAGC GAAATTCTAT
GAGGTACAGA AATACCTCTC CCTCACTCAT CACGCCTATT CGCCTCTGCT GCTGGTGATC
AATAAAGCCA AATTCGACGC TTTAAGCCCG CAGTTCCAGG AGGCACTGCT GAGTTCCGCC
AAAGAAGCGG GTGACTATCA GCGCAAACTG GTCGCCGAAG ATCAGCAAAA AATTATCGAT
GGCATGAAAG AAGCCGGAGT TGAAGTCCTG ACCGATATCG ACCGTAAAGC CTTCAGCGAT
GCGCTGGGCA GCCAGGTGCG CGATATGTTC CTGAAAGACA ACCCGCAGGG CGCCGATCTC
CTGAAAGCCG TGGACGAGGT GCAATAA
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| Protein sequence | MKLHVIARSL LIAGLTVFSV SSLAAQSLRF GYETPQTDSQ HIAAKKFNEL LKEKTNGELT
LKLFPDSTLG NAQAMISGVR GGTIDMEMSG SNNFTGLAPV FNLLDVPFLF RDTAHAHKTL
DGKVGDELKK SLDSKGLKVL AYWENGWRDV TNSRAPVKTP GDLKGLKIRT NNSPMNIAAF
KIFGANPIPM PFSEVYTGLE TRTIDAQEHP INVVWSAKFY EVQKYLSLTH HAYSPLLLVI
NKAKFDALSP QFQEALLSSA KEAGDYQRKL VAEDQQKIID GMKEAGVEVL TDIDRKAFSD
ALGSQVRDMF LKDNPQGADL LKAVDEVQ
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