Gene SeD_A4054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4054 
Symbol 
ID6873707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3896897 
End bp3897361 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content46% 
IMG OID642787003 
Producthypothetical protein 
Protein accessionYP_002217630 
Protein GI198245361 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2731] Beta-galactosidase, beta subunit 
TIGRFAM ID[TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.60662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.509772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTTG GACATATTGC GCAGCCTAAT CCGTGCCGGC TACCGTCGGC CATAGAGCAG 
GCGCTCGATT TCCTGCGCAA TACGGACTTT CGCACGCTGG AACCTGGCGT AGTGGAAATC
GACGGCAAAA ATATCTTCGC GCAGATTATC GATATGACCA CCCGCGATGC TGCTGAAAAT
CGTCCGGAAG TCCATCGCCG CTATCTGGAT ATTCAGTTTC TGGCATGGGG CGAAGAGACA
ATTGGGGTTG CCATTGATAC CGGTAATAAT CAAATCAGCG AGTCATTATT AGAACAGCGC
GATATTATTT TTTATCACGA CAGTGAACAT GAATCATTCA TTGAAATGAT ACCGGGAAGT
TATGCCCTGT TTTTCCCGCA GGATGTTCAT CGTCCCGGTT GTAATAAAAG CATTGCTACG
CCGATACGGA AAATAGTCGT AAAAGTCGCC ATAGACGTTT TATAA
 
Protein sequence
MIFGHIAQPN PCRLPSAIEQ ALDFLRNTDF RTLEPGVVEI DGKNIFAQII DMTTRDAAEN 
RPEVHRRYLD IQFLAWGEET IGVAIDTGNN QISESLLEQR DIIFYHDSEH ESFIEMIPGS
YALFFPQDVH RPGCNKSIAT PIRKIVVKVA IDVL