Gene SeD_A4033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4033 
Symbol 
ID6871461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3876357 
End bp3876569 
Gene Length213 bp 
Protein Length70 aa 
Translation table11 
GC content47% 
IMG OID642786983 
Productmajor cold shock protein 
Protein accessionYP_002217610 
Protein GI198241852 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.661127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.575238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGTA AAATGACTGG TATCGTAAAA TGGTTCAACG CTGATAAAGG CTTCGGCTTT 
ATTACTCCTG ATGACGGTTC TAAAGACGTG TTCGTACACT TCTCCGCTAT TCAGAACGAT 
GGTTACAAAT CTCTGGACGA AGGTCAGAAA GTTTCCTTCA CCATCGAAAG CGGCGCTAAA 
GGCCCGGCAG CTGGCAACGT AACCAGCCTG TAA
 
Protein sequence
MSGKMTGIVK WFNADKGFGF ITPDDGSKDV FVHFSAIQND GYKSLDEGQK VSFTIESGAK 
GPAAGNVTSL