| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4027 |
|---|
| Symbol | |
|---|
| ID | 6875737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 3870239 |
|---|
| End bp | 3872572 |
|---|
| Gene Length | 2334 bp |
|---|
| Protein Length | 777 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642786977 |
|---|
| Product | biotin sulfoxide reductase |
|---|
| Protein accession | YP_002217604 |
|---|
| Protein GI | 198241743 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.633224 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCCACG CACCATCGCG TCATTCGGTA TTGACCGCCG CACACTGGGG GCCAGTCCGC
GTTGAAACCG ACGGAGAACG CATTTTTGCC TCGTATGGCG AACTCCCGAC GGCACACCAG
AACTCCCTGC AAACCGTTGT GCATGACCAG GTGCACAGTA AAACGCGGGT TCGCTTCCCG
ATGGTGCGTA AAGGGTTCCT GGCTTCTCCC GATAAGCCGC AAGGCATACG CGGGCAGGAT
GAGTTTGTTC GCGTAAGTTG GGATGACGCG CTGGACCTGA TCCACGCTCA GCACAAACGT
ATTCGCGAAA GTTATGGGCC ATCGTCCATC TTCGCCGGCT CCTACGGTTG GCGTTCGAAC
GGCGTATTGC ATAAAGCGGC TACACTATTG CAGCGTTACA TGGCGCTGGC GGGAGGGTAT
ACCGGCCATC TTGGCGATTA TTCCACCGGC GCGGCGCAGG CTATCATGCC TTATGTGGTG
GGTGGCAACG AGGTTTACCA GCAGCAGACT AGCTGGCCGG TGGTGCTGGA ACACAGCGAG
GTGGTGGTGC TCTGGAGCGC GAACCCGCTG AATACTCTGA AAATTGCCTG GAATGCCTCG
GATGAACAGG GGCTCGACTA TTTTGCGGCG TTGCGACAAA GCGGCAAGCG CCTGATCTGC
ATCGATCCGA TGCGATCGGA AAGCGTCGAC TTTTTTGGCG ATAAGATGGA GTGGATCGCC
CCGCATATGG GCACCGATGT GGCGTTAATG TTGGGGATCG CCCATACGCT GGTGGAAAAC
GGTTGGCAGG ATGAAGCGTT CCTTGCCCGC TGCACAACGG GTTATGACCG CTTCGCCGAC
TATCTTTTGG GCACGACCGA CGGTACGGCC AAAACAGCGG AATGGGCGGC GGAAATTTGC
GGCGTTTCTG CGGTGAAAAT CCGCGAACTG GCGGAAATAT TTCATCATAA CACCACCATG
TTGATGGCCG GTTGGGGAAT GCAGCGTCAG CAGTTCGGCG AGCAAAAGCA CTGGATGATC
GTTACGCTGG CCGCAATGCT GGGGCAGATT GGTACGCCTG GCGGCGGGTT TGGTTTTTCT
TATCATTTTG CTAACGGCGG AAACCCGACG CGCCGCGCCG CCGTGTTAGC CTCGATGCAG
GGAAGCATCC CTGGCGGGGT CGATGCGGTA GATAAAATAC CGGTGGCGCG TATTGTCGAG
GCGCTGGAAA ACCCCGGTGG GTTTTACCAA CACAATGGGA TGGATCGCCG CTTCCCGGAT
ATTCGTTTTA TCTGGTGGGC GGGCGGCGCG AACTTTACCC ATCATCAGGA TACCAACCGT
CTGATTCGCG CGTGGCAAAA ACCGGAACTG GTCGTTATCT CGGAATGTTT CTGGACGGCC
GCCGCGAAAC ACGCGGATAT TGTTCTGCCT GCGACCACCA GCTATGAGCG TAACGATTTA
ACCATGACCG GCGACTATAG CAATCAGCAT TTGGCGCCGA TGAAGCAGGT CGTGTCGCCC
CGGTGGGAGG CGCGGAATGA TTTTGACGTT TTTGCTGAAC TGAGCGAACG GTGGGAAGCC
GGCGGTTACG CTCGGTTCAC CGAAGGAAAA AGCGAGCTGG CGTGGCTGGA GACTTTCTAC
AATATTGCCG CCCAGCGTGG CGCCAGCCAG GGGGTGACGC TGCCGCCGTT TGCCGCATTC
TGGCAGGCTA ACCGTTTACT GGAGATGCCG GAAAATCCCG CCAACGCGCA GTTTGTGCGC
TTCGCGGATT TTCGCCGCGA TCCTGATAAC CATCCGCTAA AAACGGCCAG CGGCAAAATC
GAAATCTATT CTGCGCGCAT TGCCAGCTAT GGTTATGCGG ATTGTCCCGG TCATCCGATG
TGGCTGGCGC CGGATGAGTG GCACGGGAAC GCCGATGCGG GGCAGGTTCA GCTACTTTCC
GCGCATCCGG CGCACCGTCT GCATAGCCGG CTTAACTACA GTTCGTTACG GGAGCGGTAT
GCGGTGGCCG GACGCGAACC GGTGACGATT CATCCGCAGG ATGCGACAAC GCGCGGAATC
GTCGATGGCG ATACGGTACG CGTCTGGAAT CATCGCGGGC AGGTTCTGGC GGGCGCGGTC
GTTACCGACG GAATTCGGCC TGGCGTTATC TGTATTCACG AAGGCGCATG GCCGGACCCT
GAACCTACCG CAGGCGGCAT ATGCAAAAAC GGCGCGGTAA ACGTCCTGAC AAAAGATCTT
CCCAGTTCCC GGCTGGGGAA CGGTTGTGCG GGCAACACCG CGCTGGTCTG GTTTGAGAAA
TATACCGGCC CGGCGCTACC GCTTACGGCG TTTGATCCGC CTGCCAACTC ATAA
|
|---|
| Protein sequence | MTHAPSRHSV LTAAHWGPVR VETDGERIFA SYGELPTAHQ NSLQTVVHDQ VHSKTRVRFP
MVRKGFLASP DKPQGIRGQD EFVRVSWDDA LDLIHAQHKR IRESYGPSSI FAGSYGWRSN
GVLHKAATLL QRYMALAGGY TGHLGDYSTG AAQAIMPYVV GGNEVYQQQT SWPVVLEHSE
VVVLWSANPL NTLKIAWNAS DEQGLDYFAA LRQSGKRLIC IDPMRSESVD FFGDKMEWIA
PHMGTDVALM LGIAHTLVEN GWQDEAFLAR CTTGYDRFAD YLLGTTDGTA KTAEWAAEIC
GVSAVKIREL AEIFHHNTTM LMAGWGMQRQ QFGEQKHWMI VTLAAMLGQI GTPGGGFGFS
YHFANGGNPT RRAAVLASMQ GSIPGGVDAV DKIPVARIVE ALENPGGFYQ HNGMDRRFPD
IRFIWWAGGA NFTHHQDTNR LIRAWQKPEL VVISECFWTA AAKHADIVLP ATTSYERNDL
TMTGDYSNQH LAPMKQVVSP RWEARNDFDV FAELSERWEA GGYARFTEGK SELAWLETFY
NIAAQRGASQ GVTLPPFAAF WQANRLLEMP ENPANAQFVR FADFRRDPDN HPLKTASGKI
EIYSARIASY GYADCPGHPM WLAPDEWHGN ADAGQVQLLS AHPAHRLHSR LNYSSLRERY
AVAGREPVTI HPQDATTRGI VDGDTVRVWN HRGQVLAGAV VTDGIRPGVI CIHEGAWPDP
EPTAGGICKN GAVNVLTKDL PSSRLGNGCA GNTALVWFEK YTGPALPLTA FDPPANS
|
|---|
| |