Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4022 |
Symbol | |
ID | 6872980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3866594 |
End bp | 3867292 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642786972 |
Product | putative gram-negative pili assembly chaperone, N- domain |
Protein accession | YP_002217599 |
Protein GI | 198243137 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCT CACGTTTGAT ATCTTGCACA GCACTGGTGC TGGCGTTGAT TGCTCAAAAC AGTTTTGCCG GAGGCGTGGC ATTAAGCAGC ACGCGTGTTA TTTATGACGG TAGTAGAAAG GAAGCTTCTC TTACGGTAAA TAATAAAAGC ACCACGGATG AATTTCTCAT TCAGTCATGG ATTGATGATG CTAACGGTAA TAAAAAGACG CCCTTTATCA TCACTCCACC GTTATTTAAA TTAAGCCCGA CTAAAAATAA CGTTTTACGT ATTGTTAATA CGACGAACAC GTTACCGCAG GATCGCGAGT CCGTTTATTG GATTAACGTA AAAGCTATTC CTGCCAAAAG TGAAGACGCG GAAGCTAAAA ACGTACTGCA GATCGCCGTA CGTACCCGCT TAAAACTGTT CTATCGCCCG GCGGGCCTGA AAGGCAATAG CATGGACGGC TGGAACAAAC TGCAGTTCAC CAGCGCAGGG GCTAACCAGA TCAAAGTGGA AAACCCATCT GCCTTTAACC TGACGTTTAA TAAATTTTAT GCCAACGGCC GTGATATTGA AAAAACGGGA ATGGTTCCGG CAAAAGGCTC ATTGAATATT GAACTGCCAG CCGGCACCGG CAAGGTAAGC GAAGTTAAAT ACAACATTAT TAATGACTTT GGCACGGCTG GCGACATGTT GACACAGCGC GTTAACTAA
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Protein sequence | MNRSRLISCT ALVLALIAQN SFAGGVALSS TRVIYDGSRK EASLTVNNKS TTDEFLIQSW IDDANGNKKT PFIITPPLFK LSPTKNNVLR IVNTTNTLPQ DRESVYWINV KAIPAKSEDA EAKNVLQIAV RTRLKLFYRP AGLKGNSMDG WNKLQFTSAG ANQIKVENPS AFNLTFNKFY ANGRDIEKTG MVPAKGSLNI ELPAGTGKVS EVKYNIINDF GTAGDMLTQR VN
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