Gene SeD_A4018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4018 
Symbol 
ID6875050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3862414 
End bp3862941 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content51% 
IMG OID642786971 
Producthypothetical protein 
Protein accessionYP_002217598 
Protein GI198242861 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.665772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACC TTCATGCTTT GATGCCAGCG TGTTTACTGC TTACCGCTTC CGCGATGGCG 
GCACCGTCTA ATATCGGTTC TGCTGGTGAT ATCCACTTTA CCATTACTAT TAAGGCGGCT
ACCTGTGAAC TGGAAAACGA CAGTATCGAC GTCAATATGG AGACCGTGGT GCTTCAGCGC
CCGGTAAAAG TGGGTAAAGA GCTGAACCAG AAAAACTTTA GCATCGGCTT AAAAGATTGC
GCGTATGCCA CAAAGGCCAG CGTTACGATG GACGGTTCTC CGGACCCGAC TGACCCCTCG
CTTTTTGCCC TGGATAGCGG CGGCGCGACG GGCGTGGCGT TAAAAATTAA AACATCTGGT
GGGGAGCAAC AATACCCCTC CAGTACCGAC TCTACGCCTG TCGAACACAC TGTCTGGTTT
GATGGTACGA ACAAGCTGAA CTATATCGCC AGCTATGTGC CTGTTAAGCC GGATGCCACC
GTTGGCACAG CGAATGCGAC GGTGAATTTT AGCGTCACAT ACGAATAA
 
Protein sequence
MKNLHALMPA CLLLTASAMA APSNIGSAGD IHFTITIKAA TCELENDSID VNMETVVLQR 
PVKVGKELNQ KNFSIGLKDC AYATKASVTM DGSPDPTDPS LFALDSGGAT GVALKIKTSG
GEQQYPSSTD STPVEHTVWF DGTNKLNYIA SYVPVKPDAT VGTANATVNF SVTYE