| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4008 |
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| Symbol | dppC |
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| ID | 6875493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3852109 |
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| End bp | 3853011 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642786962 |
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| Product | dipeptide transporter |
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| Protein accession | YP_002217590 |
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| Protein GI | 198245574 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.912863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCACAGG TTACTGAAAA TAATGTTAAT GCCGCACCGG CGCCCATGAC GCCATTGCGG
GAGTTCTGGC ACTATTTCAA ACGCAACAAA GGCGCGGTCG TCGGGCTGGC GTATGTTCTC
ATCGTGATCC TGATTGCGGT GTTTGCCAAC TTTATTGCGC CGTACAACCC GGCAGAGCAG
TTCCGTGATG CGCTGCTGGC ACCGCCGGTC TGGCAGGAAG GCGGCAGTTG GGCGCATATT
CTGGGAACGG ATGATGTTGG TCGCGATGTC CTCTCGCGCC TGATGTATGG CGCGCGTTTG
TCACTGCTGG TCGGCTGTCT GGTGGTCGTC CTGTCGCTGG TAATGGGGAT CATTCTCGGC
CTGGTCGCGG GCTACTTCGG CGGTCTGGTC GATAACATCA TCATGCGCGT GGTCGATATT
ATGCTGGCCC TGCCGAGCCT GCTGCTGGCG CTGGTGCTGG TGGCGATCTT CGGCCCCTCC
ATCGGCAACG CTGCGCTGGC GTTGACGTTT GTGGCGCTGC CGCACTATGT CCGCTTAACC
CGCGCGGCGG TTCTGGTAGA GGTGAACCGC GATTATGTGA CTGCCTCCCG CGTGGCGGGC
GCAGGCGCGA TGCGTCAGAT GTTCGTCAAT ATTTTCCCGA ACTGCCTTGC GCCGCTGATC
GTTCAGGCGT CACTGGGCTT CTCTAACGCC ATTCTCGATA TGGCTGCCCT CGGCTTCCTG
GGGATGGGCG CACAGCCGCC TACGCCGGAA TGGGGCACCA TGCTCTCTGA CGTTCTGCAG
TTCGCGCAAA GCGCCTGGTG GGTCGTGACC TTCCCGGGGC TGGCGATTCT GCTGACGGTA
CTGGCATTTA ACCTGATGGG TGACGGGCTG CGTGACGCGC TCGATCCCAA ACTGAAGCAG
TAA
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| Protein sequence | MSQVTENNVN AAPAPMTPLR EFWHYFKRNK GAVVGLAYVL IVILIAVFAN FIAPYNPAEQ
FRDALLAPPV WQEGGSWAHI LGTDDVGRDV LSRLMYGARL SLLVGCLVVV LSLVMGIILG
LVAGYFGGLV DNIIMRVVDI MLALPSLLLA LVLVAIFGPS IGNAALALTF VALPHYVRLT
RAAVLVEVNR DYVTASRVAG AGAMRQMFVN IFPNCLAPLI VQASLGFSNA ILDMAALGFL
GMGAQPPTPE WGTMLSDVLQ FAQSAWWVVT FPGLAILLTV LAFNLMGDGL RDALDPKLKQ
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