Gene SeD_A4001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4001 
Symbol 
ID6871722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3846195 
End bp3847874 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content56% 
IMG OID642786957 
Productendoglucanase BcsG 
Protein accessionYP_002217585 
Protein GI198246095 
COG category 
COG ID 
TIGRFAM ID[TIGR03368] cellulose synthase operon protein YhjU 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGC ATACTCAAAC TCCATCAATG CCTTCTCCGC TCTGGCAGTA CTGGCGCGGT 
CTTTCCGGCT GGAACTTCTA TTTTCTGGTC AAGTTTGGCC TGCTGTGGGC AGGCTATCTG 
AATTTTCATC CTTTACTGAA TCTGGTATTC ATGGCGTTTC TGCTCATGCC AATACCAAAG 
TATCGCCTTC ACCGGTTGCG CCACTGGATT GCCATTCCCG TCGGCTTCGC GCTGTTCTGG 
CACGATACCT GGCTGCCCGG CCCGCAAAGC ATTATGAGCC AGGGGACGCA GGTGGCGGAA 
TTCAGCTCCG GTTATCTGCT CGATCTGATC GCCCGTTTTA TTAACTGGCA AATGATCGGC 
GCCATCTTCG TACTGCTGGT TGCCTGGCTT TTTTTATCAC AGTGGATTCG GGTCACGGTG 
TTTGTGGTCG CCATCATGGT ATGGCTGAAT GTCCTGACAT TAACCGGCCC GGTTTTTACG 
CTGTGGCCGG CAGGCCAGCC AACCGATACG GTGACGACAA CTGGCGGTAA CGCGGCCGCT 
ACCGTCGCGA CAGCGGGCGA TAAGCCGGTC ATCGGCGATA TGCCTGCGCA AACCGCGCCG 
CCGACGACCG CGAATCTGAA CGCCTGGTTG AACACCTTCT ATGCCGCGGA AGAAAAGCGG 
AAAACGACGT TCCCGGCGCA ACTTCCGCCT GATGCGCAGC CGTTCGACCT ATTGGTCATC 
AATATTTGTT CGCTCTCCTG GTCGGATGTC GAAGCGGCAG GCCTGATGTC ACATCCGCTA 
TGGTCGCACT TTGACATTTT GTTTAAACAC TTTAATTCCG GTACGTCTTA CAGCGGCCCG 
GCGGCCATTC GTCTGCTACG CGCCAGCTGT GGTCAACCTT CGCATACCCG ACTTTATCAA 
CCAGCCAATA ACGAATGTTA TCTGTTTGAT AATCTGGCGA AACTGGGCTT TACTCAGCAT 
CTGATGATGG ATCATAACGG TGAATTTGGC GGCTTCCTGA AAGAAGTTCG CGAAAACGGC 
GGTATGCAGA GCGAACTGAT GAACCAGTCC GGCCTGCCAA CCGCCCTGCT GTCATTCGAC 
GGCTCGCCGG TATATGACGA TCTGGCGGTC CTGAACCGCT GGTTGACAGG GGAAGAACGT 
GAAGCCAATT CCCGCTCCGC GACTTTCTTT AACCTGCTGC CGCTGCACGA TGGCAACCAC 
TTCCCCGGCG TCAGCAAAAC GGCGGATTAT AAAATCCGCG CGCAGAAACT GTTCGATGAA 
CTGGACGCCT TCTTCACCGA ACTGGAGAAA TCCGGGCGTA AGGTGATGGT GGTCGTCGTA 
CCGGAGCACG GCGGCGCGCT GAAGGGCGAC AGAATGCAGA TCTCAGGCCT GCGCGATATT 
CCCAGCCCCT CCATCACCAA CGTCCCGGCG GGCGTGAAAT TTTTTGGCAT GAAAGCCCCG 
CATGAGGGCG CGCCGATTGA TATTAACCAG CCGAGCAGCT ACCTGGCGAT TTCCGAACTG 
GTCGTACGCG CCGTGGACGG TAAGCTCTTT ACCGAAGACA GTGTGAACTG GAACAAGCTG 
ACCAGCAATC TGCCGCAAAC CGCGCCGGTT TCAGAAAACG CTAATGCGGT GGTGATTCAG 
TATCAGGGTA AGCCCTACGT TCGTCTGAAT GGCGGCGACT GGGTGCCTTA CCCGCAGTAA
 
Protein sequence
MTQHTQTPSM PSPLWQYWRG LSGWNFYFLV KFGLLWAGYL NFHPLLNLVF MAFLLMPIPK 
YRLHRLRHWI AIPVGFALFW HDTWLPGPQS IMSQGTQVAE FSSGYLLDLI ARFINWQMIG 
AIFVLLVAWL FLSQWIRVTV FVVAIMVWLN VLTLTGPVFT LWPAGQPTDT VTTTGGNAAA 
TVATAGDKPV IGDMPAQTAP PTTANLNAWL NTFYAAEEKR KTTFPAQLPP DAQPFDLLVI 
NICSLSWSDV EAAGLMSHPL WSHFDILFKH FNSGTSYSGP AAIRLLRASC GQPSHTRLYQ 
PANNECYLFD NLAKLGFTQH LMMDHNGEFG GFLKEVRENG GMQSELMNQS GLPTALLSFD 
GSPVYDDLAV LNRWLTGEER EANSRSATFF NLLPLHDGNH FPGVSKTADY KIRAQKLFDE 
LDAFFTELEK SGRKVMVVVV PEHGGALKGD RMQISGLRDI PSPSITNVPA GVKFFGMKAP 
HEGAPIDINQ PSSYLAISEL VVRAVDGKLF TEDSVNWNKL TSNLPQTAPV SENANAVVIQ 
YQGKPYVRLN GGDWVPYPQ