Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3983 |
Symbol | |
ID | 6875532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3821448 |
End bp | 3822476 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642786940 |
Product | putative ribonuclease |
Protein accession | YP_002217568 |
Protein GI | 198243309 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) [TIGR00766] ribonuclease, putative |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 0.344715 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCAGG AAAATGACGT AAAACGCCCT ATTCAGGAAC TGGAGCACGA CCCGATACAA AAAATAGAAA CGCAGCCGCA TGACGCCCCG GAAAAAAACG AAAAGGCAAA TCAGGCGTTG CATTCCGTCA CCACCCTGAT GCAAAAAATT CAGCGTCAAC CAATGGTGGC CCACCTCATT CGCGCGACCG AACGTTTTAA CGATCGACTG GGTAATCAGT TTGGCGCGGC TATCACCTAC TTTTCGTTTC TGTCGATGAT CCCGATAATG ATGGTGTCCT TTGCCGCGGC AGGTTTTATC CTCGCCTCGC ACCCTAATCT ACTGGAAGAT ATTTTCAGCA AGATATTGAT GAATGTGAGC GATCCTACGC TGGCGTCCAC GCTTAAAAAT ACGATTAATA CGGCGGTTCA ACAGCGTACC ACGGTAGGGC TGGTCGGACT GGGTATCGCG CTCTATTCCG GCGTTAACTG GATGGGCAAC CTGCGGGAAG CGATTCGCGC CCAGTCACGG GACGTCTGGG AGCGCAAGCC GCAGGATCAG GAGAAAATCT GGCTCAAATA TCTGCGCGAT TTTATCTCGC TGATTGGATT ATTAATCGCT TTAATCATTA CGCTGTCCAT TACTTCCATC GCCGGTTCCG CCCAGCAGAT GATCATCTCC GCCTTGTATC TCGACAGCAT CGAATGGTTA AAACCGGCCT GGCATTTGAT CGGTCTGGCC ATCTCTATTT TTGCCAACTA TCTACTTTTT TTCTGGATTT TCTGGCGACT GCCTCGCCAT CGTCCCCGTA AAAAAGCGTT GATTCGCGGG ACATTTATCG CCGCTATCGG TTTTGAGGTG ATTAAAATCA TTATGACCTA TACGCTGCCG TCACTGGTGA AATCGCCTTC CGGCGCGGCG TTTGGCTCCG TACTCGGTCT GATGGCCTTC TTCTACTTTT TTGCCCGCCT GACGTTATTC TGCGCGGCCT GGATAGCCAC CGCCGAATAC AAGGACGACC CGCGAATGCC GGGTAAAACG CAACGCTAG
|
Protein sequence | MTQENDVKRP IQELEHDPIQ KIETQPHDAP EKNEKANQAL HSVTTLMQKI QRQPMVAHLI RATERFNDRL GNQFGAAITY FSFLSMIPIM MVSFAAAGFI LASHPNLLED IFSKILMNVS DPTLASTLKN TINTAVQQRT TVGLVGLGIA LYSGVNWMGN LREAIRAQSR DVWERKPQDQ EKIWLKYLRD FISLIGLLIA LIITLSITSI AGSAQQMIIS ALYLDSIEWL KPAWHLIGLA ISIFANYLLF FWIFWRLPRH RPRKKALIRG TFIAAIGFEV IKIIMTYTLP SLVKSPSGAA FGSVLGLMAF FYFFARLTLF CAAWIATAEY KDDPRMPGKT QR
|
| |