Gene SeD_A3955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3955 
Symbol 
ID6872915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3790451 
End bp3791029 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content58% 
IMG OID642786914 
Productholo-(acyl carrier protein) synthase 2 
Protein accessionYP_002217542 
Protein GI198241809 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2091] Phosphopantetheinyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.786973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCAGA TCGTTCTGGG AAAAGTGTCA ACATTAAGCG CAGGTCAATT GCCCGACGCG 
TTAATCGCTC AGGCGCCGCA GGGCGTTCGC CGGGCAAGCT GGCTGGCCGG GCGCGTGCTG
CTTTCCCGTG CGCTCTCGCC GCTACCGGAG ATGGTGTATG GCGAACAGGG TAAACCGGCT
TTTTCCGCCG GAACGCCGCT GTGGTTTAAC CTCAGCCATA GCGGCGACAC TATTGCTCTG
TTGCTTAGCG ACGAAGGTGA AGTCGGCTGC GATATTGAAG TGATCCGCCC GCGCGATAAC
TGGCGTTCGC TGGCAAATGC GGTATTCAGC CTCGGCGAAC ATGCTGAAAT GGAAGCGGAA
CGTCCGGAGC AACAACTGGC GGCATTCTGG CGTATCTGGA CGCGTAAAGA AGCCATCGTA
AAACAACGCG GCGGCAGCGC CTGGCAAATC GTCAGCGTGG ACAGCACGTT GCCCTCTGCC
TTGTCGGTCA GCCAGTGTCA GCTCGATACG CTCAGTCTGG CAGTCTGTAC CCCCACACCG
TTTACGCTGA CGCCGCAGAC GATAACAAAA GCGTTATGA
 
Protein sequence
MYQIVLGKVS TLSAGQLPDA LIAQAPQGVR RASWLAGRVL LSRALSPLPE MVYGEQGKPA 
FSAGTPLWFN LSHSGDTIAL LLSDEGEVGC DIEVIRPRDN WRSLANAVFS LGEHAEMEAE
RPEQQLAAFW RIWTRKEAIV KQRGGSAWQI VSVDSTLPSA LSVSQCQLDT LSLAVCTPTP
FTLTPQTITK AL